RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 WFDC10AQ9H1F0 79 aa4.91□□□□□ -1.62
CHRNA3-204ENST00000559002 TUBA4BQ9H853 241 aa4.91□□□□□ -1.62
CHRNA3-204ENST00000559002 SRD5A3Q9H8P0 318 aa4.91□□□□□ -1.62
CHRNA3-204ENST00000559002 MANBALQ9NQG1 85 aa4.91□□□□□ -1.62
CHRNA3-204ENST00000559002 GNG13Q9P2W3 67 aa4.91□□□□□ -1.62
CHRNA3-204ENST00000559002 RPH3ALQ9UNE2 315 aa4.91□□□□□ -1.62
CHRNA3-204ENST00000559002 ARL2-SNX15V9GYD0 113 aa4.91□□□□□ -1.62
CHRNA3-204ENST00000559002 A0A1W2PRE2 83 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 KNCNA6PVL3 124 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 ZNF705FA8MVS1 300 aaPredicted RBP4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 M0R3E3 92 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 PAGE4O60829 102 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 SLC25A5P05141 298 aaKnown RBP4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 HIST1H1AQ02539 215 aaPredicted RBP4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 ZNF124Q15973 351 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 ACTL10Q5JWF8 245 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 STHQ8IWL8 128 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 Q8N1Y9 231 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 C5orf17Q8NAS9 161 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 OR10J6PQ8NGY7 276 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 RXFP4Q8TDU9 374 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 PCNPQ8WW12 178 aaKnown RBP4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 NKX6-2Q9C056 277 aaPredicted RBP4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 SAV1Q9H4B6 383 aaPredicted RBP4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 C19orf73Q9NVV2 129 aa4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 YTHDF2Q9Y5A9 579 aaKnown RBP4.9□□□□□ -1.63
CHRNA3-204ENST00000559002 A0A0J9YX75 114 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 FAM74A7A6NL05 159 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 GGTLC3B5MD39 225 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 C11orf94C9JXX5 98 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 F6UB75 175 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 F6UZH7 168 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 K7EQM0 130 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 DUSP14O95147 198 aaKnown RBP4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 IGHV4-30-4P0DP06 118 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 PRB4P10163 310 aaPredicted RBP4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 BCL2P10415 239 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 HLA-DRB4P13762 266 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 RPL35AP18077 110 aaKnown RBP4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 TAGLN2P37802 199 aaKnown RBP4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 DEFB1P60022 68 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 SUMO1P63165 101 aaKnown RBP4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 GNG5P63218 68 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 CCL20P78556 96 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 HAGHQ16775 308 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 DEFB121Q5J5C9 76 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 OR4B1Q8NGF8 309 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 OR8A1Q8NGG7 326 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 MRAPQ8TCY5 172 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 TCEAL7Q9BRU2 100 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 PPP1R14DQ9NXH3 145 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 HLA-DRB4X5D2U9 266 aa4.89□□□□□ -1.63
CHRNA3-204ENST00000559002 IGKV2-40A0A087WW87 121 aaPredicted RBP4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 LOC102724200A0A096LPH7 203 aaPredicted RBP4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 SERTM2A0A1B0GWG4 89 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 DIRC3C9JPN6 131 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 PRAC2D3DTV9 90 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 H3BMM0 161 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 K7EIL1 84 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 PEX7O00628 323 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 IGKV2D-40P01614 121 aaPredicted RBP4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 IGKV3-20P01619 116 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 NMBP08949 121 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 ZNF705DP0CH99 300 aaPredicted RBP4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 ZNF705BP0CI00 300 aaPredicted RBP4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 ATP5G3P48201 142 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 CNN1P51911 297 aaKnown RBP4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 NUTF2P61970 127 aaKnown RBP4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 DEFA6Q01524 100 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 TOR2AQ5JU69 321 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 TMEM78Q5T7P6 136 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 GDF5OSQ5U4N7 250 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 GOLT1AQ6ZVE7 132 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 ARL6IP6Q8N6S5 226 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 CYB561D1Q8N8Q1 229 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 LYPD6BQ8NI32 183 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 HIST1H2BAQ96A08 127 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 CITED4Q96RK1 184 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 TXNDC17Q9BRA2 123 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 ATG101Q9BSB4 218 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 EPDR1Q9UM22 224 aa4.88□□□□□ -1.63
CHRNA3-204ENST00000559002 NBEAL2Q6ZNJ1 2754 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 LOC102723971A0A1B0GUV8 181 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 RBAKDNA6NC62 111 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 RBFOX3A6NFN3 312 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 NPIPB6E9PJ23 425 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 PDE6DO43924 150 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 TCRAP04437 139 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 AKR1C3P42330 323 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 APOC4P55056 127 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 UBE2G1P62253 170 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 MEF2BQ02080 365 aaPredicted RBP4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 ERCC8Q13216 396 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 PMS2P11Q13670 270 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 CLLU1Q5K131 121 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 MORN3Q6PF18 240 aaPredicted RBP4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 TRPT1Q86TN4 253 aaKnown RBP4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 LINC00477Q96M19 166 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 FAM210AQ96ND0 272 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 EIF5A2Q9GZV4 153 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms