RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 ZNF492Q9P255 531 aa5.97□□□□□ -1.45
LRRC28-211ENST00000558890 PLXNB1O43157 2135 aa5.96□□□□□ -1.45
LRRC28-211ENST00000558890 IGHG4P01861 327 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 TCRAP04437 139 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 PPIFP30405 207 aaKnown RBP5.96□□□□□ -1.46
LRRC28-211ENST00000558890 KRTAP10-3P60369 221 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 PAFAH1B2P68402 229 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 SLC35B1P78383 322 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 CFHR3Q02985 330 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 Q0VG73 95 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 Q56UQ5 140 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 CT83Q5H943 113 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 MRPL54Q6P161 138 aaKnown RBP5.96□□□□□ -1.46
LRRC28-211ENST00000558890 TMEM136Q6ZRR5 245 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 Q6ZSV7 163 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 FAM110DQ8TAY7 271 aaPredicted RBP5.96□□□□□ -1.46
LRRC28-211ENST00000558890 WIPF2Q8TF74 440 aaPredicted RBP5.96□□□□□ -1.46
LRRC28-211ENST00000558890 DAZAP1Q96EP5 407 aaKnown RBP5.96□□□□□ -1.46
LRRC28-211ENST00000558890 RNF125Q96EQ8 232 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 FAM103A1Q9BTL3 118 aaKnown RBP5.96□□□□□ -1.46
LRRC28-211ENST00000558890 RPP21Q9H633 154 aaKnown RBP5.96□□□□□ -1.46
LRRC28-211ENST00000558890 C21orf62Q9NYP8 219 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 MRPL27Q9P0M9 148 aaKnown RBP5.96□□□□□ -1.46
LRRC28-211ENST00000558890 KLF12Q9Y4X4 402 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 TNCP24821 2201 aa5.96□□□□□ -1.46
LRRC28-211ENST00000558890 NOTCH1P46531 2555 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 IGLV11-55A0A075B6I3 123 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 TRAV41A0A0B4J266 112 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 TRBV6-1A0A0K0K1D8 114 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 CLPSL1A2RUU4 121 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 GRIFINA4D1Z8 144 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 FAM223BA6NKX1 122 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 A8MWL6 223 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 ATP6V0E1O15342 81 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 SPINK4O60575 86 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 IGKV1-17P01599 117 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 IGLV1-40P01703 118 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 P01737 135 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 APCSP02743 223 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 IL4P05112 153 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 ELANEP08246 267 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 SNRPCP09234 159 aaKnown RBP5.95□□□□□ -1.46
LRRC28-211ENST00000558890 GZMBP10144 247 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 ESDP10768 282 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 EGR2P11161 476 aaPredicted RBP5.95□□□□□ -1.46
LRRC28-211ENST00000558890 BLCAPP62952 87 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 DEFA6Q01524 100 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 FOXE3Q13461 319 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 OR10J3Q5JRS4 329 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 LEMD1Q68G75 181 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 TET2Q6N021 2002 aaPredicted RBP5.95□□□□□ -1.46
LRRC28-211ENST00000558890 Q6ZS46 218 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 ATP5L2Q7Z4Y8 100 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 Q86TA4 180 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 FAM223AQ8IWN6 122 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 LYPD1Q8N2G4 141 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 NUDT10Q8NFP7 164 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 OR4B1Q8NGF8 309 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 LINC01006Q8NI28 216 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 MYOZ3Q8TDC0 251 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 TSKUQ8WUA8 353 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 NUDT11Q96G61 164 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 LINC00479Q96M42 142 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 NOL4LQ96MY1 436 aaPredicted RBP5.95□□□□□ -1.46
LRRC28-211ENST00000558890 MS4A10Q96PG2 267 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 HSPB9Q9BQS6 159 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 SAMD10Q9BYL1 202 aa5.95□□□□□ -1.46
LRRC28-211ENST00000558890 TRBV19A0A075B6N1 114 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 SERTM2A0A1B0GWG4 89 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 H3BTX0 84 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 SERF1AO75920 110 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 SCGB1D1O95968 90 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 CA1P00915 261 aaPredicted RBP5.94□□□□□ -1.46
LRRC28-211ENST00000558890 LTAP01374 205 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 PSMB8P28062 276 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 CSN1S1P47710 185 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 PROK1P58294 105 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 NDPQ00604 133 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 C9orf152Q5JTZ5 239 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 CDPF1Q6NVV7 123 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 GOLT1AQ6ZVE7 132 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 TMEM256Q8N2U0 113 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 TMEM75Q8N9X5 138 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 USMG5Q96IX5 58 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 KCNS1Q96KK3 526 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 NEU1Q99519 415 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 TXN2Q99757 166 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 AAMDCQ9H7C9 122 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 ZNF586Q9NXT0 402 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 FBN3Q75N90 2809 aa5.94□□□□□ -1.46
LRRC28-211ENST00000558890 A0A0G2JLM5 398 aa5.93□□□□□ -1.46
LRRC28-211ENST00000558890 WI2-2373I1.2A0A1W2PRP0 233 aa5.93□□□□□ -1.46
LRRC28-211ENST00000558890 ZNF705FA8MVS1 300 aaPredicted RBP5.93□□□□□ -1.46
LRRC28-211ENST00000558890 OR2J3O76001 311 aa5.93□□□□□ -1.46
LRRC28-211ENST00000558890 ZNF705DP0CH99 300 aaPredicted RBP5.93□□□□□ -1.46
LRRC28-211ENST00000558890 ZNF705BP0CI00 300 aaPredicted RBP5.93□□□□□ -1.46
LRRC28-211ENST00000558890 IGLC2P0DOY2 106 aa5.93□□□□□ -1.46
LRRC28-211ENST00000558890 RPL7P18124 248 aaKnown RBP5.93□□□□□ -1.46
LRRC28-211ENST00000558890 DDTP30046 118 aa5.93□□□□□ -1.46
LRRC28-211ENST00000558890 SRIP30626 198 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms