RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 UMAD1C9J7I0 102 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 PRAC2D3DTV9 90 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 MBP02144 154 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 NMBP08949 121 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 ARL14EPLP0DKL9 152 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 HIST1H1EP10412 219 aaKnown RBP5.35□□□□□ -1.55
TRAF3-206ENST00000558880 RPL7P18124 248 aaKnown RBP5.35□□□□□ -1.55
TRAF3-206ENST00000558880 GCHFRP30047 84 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 FGF8P55075 233 aaPredicted RBP5.35□□□□□ -1.55
TRAF3-206ENST00000558880 RHOBP62745 196 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 EIF5AP63241 154 aaKnown RBP5.35□□□□□ -1.55
TRAF3-206ENST00000558880 DEFB121Q5J5C9 76 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 GDF5OSQ5U4N7 250 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 LCN15Q6UWW0 184 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 OR8I2Q8N0Y5 310 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 SPAG8Q99932 426 aaPredicted RBP5.35□□□□□ -1.55
TRAF3-206ENST00000558880 MLST8Q9BVC4 326 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 OR51M1Q9H341 326 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 MAP6D1Q9H9H5 199 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 NRN1Q9NPD7 142 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 ZNF331Q9NQX6 463 aaPredicted RBP5.35□□□□□ -1.55
TRAF3-206ENST00000558880 SORL1Q92673 2214 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 MAP1LC3B2A6NCE7 125 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 RBMY1BA6NDE4 496 aaKnown RBP5.34□□□□□ -1.55
TRAF3-206ENST00000558880 RBMY1EA6NEQ0 496 aaKnown RBP5.34□□□□□ -1.55
TRAF3-206ENST00000558880 HELTA6NFD8 242 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 GGTLC3B5MD39 225 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 K7EIL1 84 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 M0R3E3 92 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 NBEAP1P0C6P0 100 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 RBMY1DP0C7P1 496 aaKnown RBP5.34□□□□□ -1.55
TRAF3-206ENST00000558880 TFPI2P48307 235 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 AKR1C8PQ5T2L2 129 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 DPPA3Q6W0C5 159 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 LINC00322Q6ZN03 302 aaPredicted RBP5.34□□□□□ -1.55
TRAF3-206ENST00000558880 BPIFA4PQ86YQ2 179 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 CCDC28AQ8IWP9 274 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 RNF182Q8N6D2 247 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 FAM213BQ8TBF2 198 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 DYNLRB2Q8TF09 96 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 GPR82Q96P67 336 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 PRR25Q96S07 402 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 PAXXQ9BUH6 204 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 ACTR3CQ9C0K3 210 aaPredicted RBP5.34□□□□□ -1.55
TRAF3-206ENST00000558880 MAP1LC3BQ9GZQ8 125 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 YTHDF2Q9Y5A9 579 aaKnown RBP5.34□□□□□ -1.55
TRAF3-206ENST00000558880 TENM3Q9P273 2699 aa5.34□□□□□ -1.55
TRAF3-206ENST00000558880 A8MTW9 85 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 ZNF705FA8MVS1 300 aaPredicted RBP5.33□□□□□ -1.56
TRAF3-206ENST00000558880 F6UB75 175 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 ZNF253O75346 499 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 GIG44P09565 113 aaPredicted RBP5.33□□□□□ -1.56
TRAF3-206ENST00000558880 GALR1P47211 349 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 RAB5CP51148 216 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 PMS2P11Q13670 270 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 KHDC3LQ587J8 217 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 LCN12Q6JVE5 192 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 PQLC2Q6ZP29 291 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 EXOC3-AS1Q8N2X6 119 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 STXBP6Q8NFX7 210 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 GRAMD2BQ96HH9 432 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 NEU1Q99519 415 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 FAM110AQ9BQ89 295 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 TMEM231Q9H6L2 316 aa5.33□□□□□ -1.56
TRAF3-206ENST00000558880 A0A1W2PPV4 95 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 FAM74A7A6NL05 159 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 ISLRO14498 428 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 OR7C2O60412 319 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 CD5P06127 495 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 ZNF688P0C7X2 276 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 C4BPBP20851 252 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 DEFB131AP59861 70 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 UBE2L3P68036 154 aaKnown RBP5.32□□□□□ -1.56
TRAF3-206ENST00000558880 PDE6HQ13956 83 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 GUCA2BQ16661 112 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 AMTNQ6UX39 209 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 RBPMS2Q6ZRY4 209 aaKnown RBP5.32□□□□□ -1.56
TRAF3-206ENST00000558880 APRG1Q8IVJ8 170 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 DEFB125Q8N687 156 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 SFT2D1Q8WV19 159 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 UBQLN2Q9UHD9 624 aa5.32□□□□□ -1.56
TRAF3-206ENST00000558880 A0A1B0GV50 99 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 KNCNA6PVL3 124 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 ZNF705EA8MWA4 302 aaPredicted RBP5.31□□□□□ -1.56
TRAF3-206ENST00000558880 A8MZ25 164 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 C9JQL5 133 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 CXorf1O96002 111 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 IGLV2-11P01706 119 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 ZNF705DP0CH99 300 aaPredicted RBP5.31□□□□□ -1.56
TRAF3-206ENST00000558880 ZNF705BP0CI00 300 aaPredicted RBP5.31□□□□□ -1.56
TRAF3-206ENST00000558880 BMI1P35226 326 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 ATP5G3P48201 142 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 PSMB3P49720 205 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 TAS2R45P59539 299 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 RANP62826 216 aaKnown RBP5.31□□□□□ -1.56
TRAF3-206ENST00000558880 PSG3Q16557 428 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 GUK1Q16774 197 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 EIF5AL1Q6IS14 154 aaKnown RBP5.31□□□□□ -1.56
TRAF3-206ENST00000558880 BLNKQ8WV28 456 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 NARS2Q96I59 477 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms