RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 SELENOKQ9Y6D0 94 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 UBR5O95071 2799 aaPredicted RBP8.25□□□□□ -1.09
CUX1-217ENST00000558836 IGHV1-69DA0A0B4J2H0 117 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 M0QZ24 198 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 IGHV1-69P01742 117 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 MT-ND6P03923 174 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 NTF3P20783 257 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 CRIP1P50238 77 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 CCDC140Q96MF4 163 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 RABAC1Q9UI14 185 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 CREBBPQ92793 2442 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 SONP18583 2426 aaKnown RBP8.25□□□□□ -1.09
CUX1-217ENST00000558836 AVPP01185 164 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 TPPP2P59282 170 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 Q0VG73 95 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 LCNL1Q6ZST4 164 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 FAM110DQ8TAY7 271 aaPredicted RBP8.25□□□□□ -1.09
CUX1-217ENST00000558836 ZNF502Q8TBZ5 544 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 WFDC12Q8WWY7 111 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 AAMDCQ9H7C9 122 aa8.25□□□□□ -1.09
CUX1-217ENST00000558836 MYO9AB2RTY4 2548 aa8.24□□□□□ -1.09
CUX1-217ENST00000558836 A0A1W2PS18 150 aa8.24□□□□□ -1.09
CUX1-217ENST00000558836 A8MWL6 223 aa8.24□□□□□ -1.09
CUX1-217ENST00000558836 AMTP48728 403 aa8.24□□□□□ -1.09
CUX1-217ENST00000558836 PSG3Q16557 428 aa8.24□□□□□ -1.09
CUX1-217ENST00000558836 Q6ZS46 218 aa8.24□□□□□ -1.09
CUX1-217ENST00000558836 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
CUX1-217ENST00000558836 C18orf32Q8TCD1 76 aa8.24□□□□□ -1.09
CUX1-217ENST00000558836 VN1R17PQ8TDU5 208 aa8.24□□□□□ -1.09
CUX1-217ENST00000558836 H3BUX3 64 aa8.23□□□□□ -1.09
CUX1-217ENST00000558836 KRTDAPP60985 99 aa8.23□□□□□ -1.09
CUX1-217ENST00000558836 PKIAP61925 76 aa8.23□□□□□ -1.09
CUX1-217ENST00000558836 BLCAPP62952 87 aa8.23□□□□□ -1.09
CUX1-217ENST00000558836 SIGLECL1Q8N7X8 197 aa8.23□□□□□ -1.09
CUX1-217ENST00000558836 ZNF48Q96MX3 618 aaPredicted RBP8.23□□□□□ -1.09
CUX1-217ENST00000558836 VGLL1Q99990 258 aa8.23□□□□□ -1.09
CUX1-217ENST00000558836 NAGKQ9UJ70 344 aa8.23□□□□□ -1.09
CUX1-217ENST00000558836 GPX1P07203 203 aa8.23□□□□□ -1.09
CUX1-217ENST00000558836 HIF1ANQ9NWT6 349 aa8.23□□□□□ -1.09
CUX1-217ENST00000558836 K7EQM0 130 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 RPL7P18124 248 aaKnown RBP8.22□□□□□ -1.09
CUX1-217ENST00000558836 PMCHL1Q16048 86 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 Q5PR19 223 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 TMEM75Q8N9X5 138 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 CHD6Q8TD26 2715 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 A0A1B0GXF2 115 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 PRAC2D3DTV9 90 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 CHEK1O14757 476 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 TRBV12-3P01733 135 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 IGHV3-11P01762 117 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 IGHG4P01861 327 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 HBBP68871 147 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 C2orf88Q9BSF0 95 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 POLR3KQ9Y2Y1 108 aaPredicted RBP8.22□□□□□ -1.09
CUX1-217ENST00000558836 APCP25054 2843 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 TRAV41A0A0B4J266 112 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 ARMS2P0C7Q2 107 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 ZNF138P52744 262 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 PAFAH1B2P68402 229 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 ERCC8Q13216 396 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 RBPMS2Q6ZRY4 209 aaKnown RBP8.22□□□□□ -1.09
CUX1-217ENST00000558836 WIPF2Q8TF74 440 aaPredicted RBP8.22□□□□□ -1.09
CUX1-217ENST00000558836 SMIM12Q96EX1 92 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 ZFAND3Q9H8U3 227 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 NRN1Q9NPD7 142 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 ZNF492Q9P255 531 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 MOB4Q9Y3A3 225 aa8.22□□□□□ -1.09
CUX1-217ENST00000558836 CLPSL1A2RUU4 121 aa8.21□□□□□ -1.09
CUX1-217ENST00000558836 MSMBP08118 114 aa8.21□□□□□ -1.09
CUX1-217ENST00000558836 CSN1S1P47710 185 aa8.21□□□□□ -1.09
CUX1-217ENST00000558836 LBHQ53QV2 105 aaPredicted RBP8.21□□□□□ -1.09
CUX1-217ENST00000558836 OR10J3Q5JRS4 329 aa8.21□□□□□ -1.09
CUX1-217ENST00000558836 RNASEKQ6P5S7 137 aaKnown RBP8.21□□□□□ -1.09
CUX1-217ENST00000558836 LYPD1Q8N2G4 141 aa8.21□□□□□ -1.09
CUX1-217ENST00000558836 ALKBH7Q9BT30 221 aaPredicted RBP8.21□□□□□ -1.09
CUX1-217ENST00000558836 SETD2Q9BYW2 2564 aaPredicted RBP8.21□□□□□ -1.1
CUX1-217ENST00000558836 BUB3O43684 328 aa8.21□□□□□ -1.1
CUX1-217ENST00000558836 TRGV3P03979 118 aa8.21□□□□□ -1.1
CUX1-217ENST00000558836 ESDP10768 282 aa8.21□□□□□ -1.1
CUX1-217ENST00000558836 COX19Q49B96 90 aa8.21□□□□□ -1.1
CUX1-217ENST00000558836 KCNS1Q96KK3 526 aa8.21□□□□□ -1.1
CUX1-217ENST00000558836 SORL1Q92673 2214 aa8.21□□□□□ -1.1
CUX1-217ENST00000558836 NF1P21359 2839 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 A8MWP6 167 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 NPIPB6E9PJ23 425 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 KLK15Q9H2R5 256 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 ZFP30Q9Y2G7 519 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 PAM16Q9Y3D7 125 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 TMEM8BA6NDV4 472 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 ZNF324O75467 553 aaPredicted RBP8.2□□□□□ -1.1
CUX1-217ENST00000558836 RAB4AP20338 218 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 ZNF80P51504 273 aaPredicted RBP8.2□□□□□ -1.1
CUX1-217ENST00000558836 NUTF2P61970 127 aaKnown RBP8.2□□□□□ -1.1
CUX1-217ENST00000558836 ATP5G2Q06055 141 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 PDE6HQ13956 83 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 LCN12Q6JVE5 192 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 EEF1AKMT3Q96AZ1 226 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 TXN2Q99757 166 aa8.2□□□□□ -1.1
CUX1-217ENST00000558836 SCGB2A1O75556 95 aa8.19□□□□□ -1.1
CUX1-217ENST00000558836 CT45A10P0DMU9 189 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms