RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 NDUFA4O00483 81 aa9.9□□□□□ -0.82
SMAD3-207ENST00000558763 C1orf194Q5T5A4 169 aa9.9□□□□□ -0.82
SMAD3-207ENST00000558763 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.9□□□□□ -0.82
SMAD3-207ENST00000558763 Q8N2B8 174 aa9.9□□□□□ -0.82
SMAD3-207ENST00000558763 CMTM2Q8TAZ6 248 aa9.9□□□□□ -0.82
SMAD3-207ENST00000558763 MYOZ3Q8TDC0 251 aa9.9□□□□□ -0.82
SMAD3-207ENST00000558763 ZNF331Q9NQX6 463 aaPredicted RBP9.9□□□□□ -0.82
SMAD3-207ENST00000558763 C2CD3Q4AC94 2353 aa9.9□□□□□ -0.82
SMAD3-207ENST00000558763 IGHV3-49A0A0A0MS15 119 aa9.9□□□□□ -0.83
SMAD3-207ENST00000558763 TMEM89A2RUT3 159 aa9.9□□□□□ -0.83
SMAD3-207ENST00000558763 C19orf71A6NCJ1 209 aa9.9□□□□□ -0.83
SMAD3-207ENST00000558763 HLA-DMBP28068 263 aa9.9□□□□□ -0.83
SMAD3-207ENST00000558763 NUDT10Q8NFP7 164 aa9.9□□□□□ -0.83
SMAD3-207ENST00000558763 NUDT11Q96G61 164 aa9.9□□□□□ -0.83
SMAD3-207ENST00000558763 METTL26Q96S19 204 aa9.9□□□□□ -0.83
SMAD3-207ENST00000558763 BIN3Q9NQY0 253 aa9.9□□□□□ -0.83
SMAD3-207ENST00000558763 TRAV9-1A0A075B6T8 112 aa9.89□□□□□ -0.83
SMAD3-207ENST00000558763 A0A0G2JLM5 398 aa9.89□□□□□ -0.83
SMAD3-207ENST00000558763 CA1P00915 261 aaPredicted RBP9.89□□□□□ -0.83
SMAD3-207ENST00000558763 FRMD6-AS1P0C7T7 363 aa9.89□□□□□ -0.83
SMAD3-207ENST00000558763 SNRPEP62304 92 aaKnown RBP9.89□□□□□ -0.83
SMAD3-207ENST00000558763 PSG9Q00887 426 aa9.89□□□□□ -0.83
SMAD3-207ENST00000558763 ACTL10Q5JWF8 245 aa9.89□□□□□ -0.83
SMAD3-207ENST00000558763 IGFL4Q6B9Z1 124 aa9.89□□□□□ -0.83
SMAD3-207ENST00000558763 TMEM183AQ8IXX5 376 aa9.89□□□□□ -0.83
SMAD3-207ENST00000558763 GLMPQ8WWB7 406 aa9.89□□□□□ -0.83
SMAD3-207ENST00000558763 SAV1Q9H4B6 383 aaPredicted RBP9.89□□□□□ -0.83
SMAD3-207ENST00000558763 SMIM27A0A1W2PRY6 76 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 TRGC1P0CF51 173 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 S100A7P31151 101 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 PSG3Q16557 428 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 RPEL1Q2QD12 228 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 C16orf54Q6UWD8 224 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 ARL6IP6Q8N6S5 226 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 ASCL2Q99929 193 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 AAMDCQ9H7C9 122 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 SERTAD4Q9NUC0 356 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 ZNF492Q9P255 531 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 UBE2CO00762 179 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 FAM209BQ5JX69 171 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 PRR27Q6MZM9 219 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 RNF152Q8N8N0 203 aa9.88□□□□□ -0.83
SMAD3-207ENST00000558763 TRAV8-2A0A0B4J237 113 aa9.87□□□□□ -0.83
SMAD3-207ENST00000558763 RPLP1P05386 114 aaKnown RBP9.87□□□□□ -0.83
SMAD3-207ENST00000558763 PRNTQ86SH4 94 aa9.87□□□□□ -0.83
SMAD3-207ENST00000558763 GPHB5Q86YW7 130 aa9.87□□□□□ -0.83
SMAD3-207ENST00000558763 PSG8Q9UQ74 426 aa9.87□□□□□ -0.83
SMAD3-207ENST00000558763 ATRQ13535 2644 aa9.86□□□□□ -0.83
SMAD3-207ENST00000558763 IGKV2-40A0A087WW87 121 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-207ENST00000558763 ZNF705GA8MUZ8 300 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-207ENST00000558763 NPIPB6E9PJ23 425 aa9.86□□□□□ -0.83
SMAD3-207ENST00000558763 CHEK1O14757 476 aa9.86□□□□□ -0.83
SMAD3-207ENST00000558763 IGKV2D-40P01614 121 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-207ENST00000558763 ZC2HC1AQ96GY0 325 aa9.86□□□□□ -0.83
SMAD3-207ENST00000558763 PEF1Q9UBV8 284 aaKnown RBP9.86□□□□□ -0.83
SMAD3-207ENST00000558763 ZNF705FA8MVS1 300 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-207ENST00000558763 TCL1AP56279 114 aa9.86□□□□□ -0.83
SMAD3-207ENST00000558763 FOXE3Q13461 319 aa9.86□□□□□ -0.83
SMAD3-207ENST00000558763 LINC01006Q8NI28 216 aa9.86□□□□□ -0.83
SMAD3-207ENST00000558763 BTF3L4Q96K17 158 aa9.86□□□□□ -0.83
SMAD3-207ENST00000558763 SERTM2A0A1B0GWG4 89 aa9.85□□□□□ -0.83
SMAD3-207ENST00000558763 PRAC2D3DTV9 90 aa9.85□□□□□ -0.83
SMAD3-207ENST00000558763 GATCO43716 136 aaKnown RBP9.85□□□□□ -0.83
SMAD3-207ENST00000558763 FABP9Q0Z7S8 132 aa9.85□□□□□ -0.83
SMAD3-207ENST00000558763 C8orf86Q6ZUL3 223 aa9.85□□□□□ -0.83
SMAD3-207ENST00000558763 RNF182Q8N6D2 247 aa9.85□□□□□ -0.83
SMAD3-207ENST00000558763 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.85□□□□□ -0.83
SMAD3-207ENST00000558763 ZFP30Q9Y2G7 519 aa9.85□□□□□ -0.83
SMAD3-207ENST00000558763 HAX1O00165 279 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 S100A6P06703 90 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 ELANEP08246 267 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 EDN2P20800 178 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 CRIP1P50238 77 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 COX8CQ7Z4L0 72 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 PRIMA1Q86XR5 153 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 GRAMD2BQ96HH9 432 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 VGLL1Q99990 258 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 SLC50A1Q9BRV3 221 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 C16orf95Q9H693 158 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 IFITM10A6NMD0 228 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 K7EQM0 130 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 SOCS3O14543 225 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 NDUFA7O95182 113 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 CBLN1P23435 193 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 SLC35B1P78383 322 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 SMUG1Q53HV7 270 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 CT83Q5H943 113 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 LCN12Q6JVE5 192 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 TSKUQ8WUA8 353 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 C8orf49Q96NF6 230 aa9.84□□□□□ -0.83
SMAD3-207ENST00000558763 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
SMAD3-207ENST00000558763 CSN1S1P47710 185 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 TM4SF20Q53R12 229 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 KLHDC1Q8N7A1 406 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 NUP35Q8NFH5 326 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 NEU1Q99519 415 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 FBN1P35555 2871 aaKnown RBP9.83□□□□□ -0.84
SMAD3-207ENST00000558763 IGHV7-4-1A0A0J9YVY3 117 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 IZUMO1RA6ND01 250 aa9.83□□□□□ -0.84
SMAD3-207ENST00000558763 HOXA5P20719 270 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms