RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 OVOL3O00110 214 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 GAGE6Q13070 117 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 SPINK13Q1W4C9 94 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 MST1LQ2TV78 715 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 GGNQ86UU5 652 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 AKAP6Q13023 2319 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 SAA4P35542 130 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 EFNA4P52798 201 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 IGHV1-24A0A0C4DH33 117 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 FREM3P0C091 2139 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 SPSB3Q6PJ21 355 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 CEND1Q8N111 149 aa11.3□□□□□ -0.6
SPG11-210ENST00000558319 XIRP1Q702N8 1843 aaKnown RBP11.3□□□□□ -0.6
SPG11-210ENST00000558319 C15orf62A8K5M9 175 aa11.3□□□□□ -0.6
SPG11-210ENST00000558319 CRYBA4P53673 196 aa11.3□□□□□ -0.6
SPG11-210ENST00000558319 PAX9P55771 341 aa11.3□□□□□ -0.6
SPG11-210ENST00000558319 Q86TA4 180 aa11.3□□□□□ -0.6
SPG11-210ENST00000558319 Q0VG73 95 aa11.3□□□□□ -0.6
SPG11-210ENST00000558319 NEGR1Q7Z3B1 354 aa11.3□□□□□ -0.6
SPG11-210ENST00000558319 COL5A3P25940 1745 aaPredicted RBP11.3□□□□□ -0.6
SPG11-210ENST00000558319 NXPH4O95158 308 aa11.3□□□□□ -0.6
SPG11-210ENST00000558319 UBL5Q9BZL1 73 aa11.3□□□□□ -0.6
SPG11-210ENST00000558319 DUX4L9Q6RFH8 374 aaPredicted RBP11.29□□□□□ -0.6
SPG11-210ENST00000558319 SS18Q15532 418 aa11.29□□□□□ -0.6
SPG11-210ENST00000558319 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
SPG11-210ENST00000558319 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
SPG11-210ENST00000558319 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
SPG11-210ENST00000558319 LHBP01229 141 aa11.29□□□□□ -0.6
SPG11-210ENST00000558319 ARID2Q68CP9 1835 aa11.29□□□□□ -0.6
SPG11-210ENST00000558319 CDPF1Q6NVV7 123 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 FLVCR1-AS1Q8TAF5 88 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 MED12Q93074 2177 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 BUB1B-PAK6H3BSN5 160 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
SPG11-210ENST00000558319 GAFA1Q96PS6 74 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 RHPN1-AS1Q9BWJ2 59 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 CACNA1GO43497 2377 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 GAGE7O76087 117 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 IL18BPO95998 194 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 IGHG3P01860 377 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 ZNF883P0CG24 379 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 GAGE12FP0CL80 117 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 GAGE12GP0CL81 117 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 GAGE12IP0CL82 117 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 VWC2Q2TAL6 325 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 COL24A1Q17RW2 1714 aa11.28□□□□□ -0.6
SPG11-210ENST00000558319 CLPSL1A2RUU4 121 aa11.27□□□□□ -0.6
SPG11-210ENST00000558319 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.6
SPG11-210ENST00000558319 Q6ZRM9 215 aa11.27□□□□□ -0.6
SPG11-210ENST00000558319 ANKRD29Q8N6D5 301 aa11.27□□□□□ -0.6
SPG11-210ENST00000558319 C15orf53Q8NAA6 179 aa11.27□□□□□ -0.6
SPG11-210ENST00000558319 B4DSR2 109 aa11.27□□□□□ -0.61
SPG11-210ENST00000558319 G3V318 75 aa11.27□□□□□ -0.61
SPG11-210ENST00000558319 WNK3Q9BYP7 1800 aa11.27□□□□□ -0.61
SPG11-210ENST00000558319 H0YJW9 148 aa11.27□□□□□ -0.61
SPG11-210ENST00000558319 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
SPG11-210ENST00000558319 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
SPG11-210ENST00000558319 hADV29S1A0JD25 119 aa11.27□□□□□ -0.61
SPG11-210ENST00000558319 COX8AP10176 69 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 CRYGSP22914 178 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 CCL25O15444 150 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 SMIM20Q8N5G0 67 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 CRLF1O75462 422 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 NCOR1P1Q9H4R4 102 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 ANK1P16157 1881 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 SPRY2O43597 315 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 A0A0J9YY99 117 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 LINC01356Q8N9X3 169 aa11.26□□□□□ -0.61
SPG11-210ENST00000558319 KLF2Q9Y5W3 355 aaPredicted RBP11.26□□□□□ -0.61
SPG11-210ENST00000558319 MYO7BQ6PIF6 2116 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 E7EQL1 145 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 IGHG4P01861 327 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 C2orf66Q6UXQ4 117 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 SCRT2Q9NQ03 307 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 MRPL51Q4U2R6 128 aaKnown RBP11.25□□□□□ -0.61
SPG11-210ENST00000558319 DEFB105AQ8NG35 78 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 DSCR8Q96T75 97 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 LRRC37AA6NMS7 1700 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 PHF3Q92576 2039 aaKnown RBP11.25□□□□□ -0.61
SPG11-210ENST00000558319 DOCK10Q96BY6 2186 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 C20orf204Q6ZNR8 217 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 THSD7AQ9UPZ6 1657 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 PFN1P07737 140 aaKnown RBP11.25□□□□□ -0.61
SPG11-210ENST00000558319 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
SPG11-210ENST00000558319 MMP23AO75900 390 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 OR11H6Q8NGC7 330 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 KIAA2026Q5HYC2 2103 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 DAD1P61803 113 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 UTF1Q5T230 341 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 NTN5Q8WTR8 489 aaPredicted RBP11.24□□□□□ -0.61
SPG11-210ENST00000558319 LYL1P12980 280 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 GFRA4Q9GZZ7 299 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 TRPT1Q86TN4 253 aaKnown RBP11.24□□□□□ -0.61
SPG11-210ENST00000558319 NDUFS5O43920 106 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 PRO1854Q9UHT4 67 aa11.24□□□□□ -0.61
SPG11-210ENST00000558319 ATP6V0E1O15342 81 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms