RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 RNF182Q8N6D2 247 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 DAND5Q8N907 189 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 OR10AC1Q8NH08 325 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 DEDD2Q8WXF8 326 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 YPEL2Q96QA6 119 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 DERL1Q9BUN8 251 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 SPANXDQ9BXN6 97 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 BANF2Q9H503 90 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 XAGE1AQ9HD64 81 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 SNX12Q9UMY4 172 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 LINC00588Q9Y4M8 146 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 SLX4Q8IY92 1834 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 NLRC5Q86WI3 1866 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 ATG2AQ2TAZ0 1938 aa1.81□□□□□ -2.12
TRAV28-201ENST00000557548 SCN4AP35499 1836 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 COL27A1Q8IZC6 1860 aaPredicted RBP1.8□□□□□ -2.12
TRAV28-201ENST00000557548 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 MYH7BA7E2Y1 1941 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 AKAP11Q9UKA4 1901 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 DOCK4Q8N1I0 1966 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 IGLV2-18A0A075B6J9 118 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 TRBV24-1A0A075B6N3 115 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 A0A087X0T9 212 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 TRAV13-1A0A0B4J241 112 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 ODAMA1E959 279 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 OR2T8A6NH00 312 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 A8MWV9 139 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 BUB1B-PAK6H3BSN5 160 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 C19orf84I3L1E1 186 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 M0R378 163 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 LECT2O14960 151 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 NDUFB3O43676 98 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 SLC25A20O43772 301 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 IGHV3-53P01767 116 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 C1QAP02745 245 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 HIST1H1BP16401 226 aaKnown RBP1.8□□□□□ -2.12
TRAV28-201ENST00000557548 NPPCP23582 126 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 PSMB8P28062 276 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 HBBP68871 147 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 RHOGP84095 191 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 MYL5Q02045 173 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 MEF2BQ02080 365 aaPredicted RBP1.8□□□□□ -2.12
TRAV28-201ENST00000557548 PLGLB1Q02325 96 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 COL5A1-AS1Q5SY13 56 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 NCMAPQ5T1S8 102 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 LCN15Q6UWW0 184 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
TRAV28-201ENST00000557548 LYZL2Q7Z4W2 148 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 SNX29P2Q8IUI4 249 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 C3orf22Q8N5N4 141 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 TEX29Q8N6K0 151 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 ZFAND2AQ8N6M9 145 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 BPIFB6Q8NFQ5 453 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 OR5D14Q8NGL3 314 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 DCANP1Q8TF63 244 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 RNASE6Q93091 150 aaKnown RBP1.8□□□□□ -2.12
TRAV28-201ENST00000557548 OR4C12Q96R67 309 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 TMEM133Q9H2Q1 129 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 Q9H521 79 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 CYTL1Q9NRR1 136 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 PRRC2AP48634 2157 aaKnown RBP1.8□□□□□ -2.12
TRAV28-201ENST00000557548 CRB1P82279 1406 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 SCN7AQ01118 1682 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 PHIPQ8WWQ0 1821 aa1.8□□□□□ -2.12
TRAV28-201ENST00000557548 MYH9P35579 1960 aaKnown RBP1.79□□□□□ -2.12
TRAV28-201ENST00000557548 IGKV1D-37A0A075B6S9 117 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 TRAV27A0A087WT01 109 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 TRGV10A0A0A0MS01 117 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 LOC100130705A0A1B0GUX0 176 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 H3BMG7 143 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 CDC42EP2O14613 210 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 CCL25O15444 150 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 HIST1H2BKO60814 126 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 NDUFB2O95178 105 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 SOD1P00441 154 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 HIST1H2BJP06899 126 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 CXCL1P09341 107 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 CRYBB3P26998 211 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF93P35789 620 aaPredicted RBP1.79□□□□□ -2.12
TRAV28-201ENST00000557548 DYNLT3P51808 116 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 TPPP2P59282 170 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 BTG2P78543 158 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 QRFPP83859 136 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 AKR1C1Q04828 323 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 LY6EQ16553 131 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 LGALS9BQ3B8N2 356 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 CCSMST1Q4G0I0 132 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 MRPL51Q4U2R6 128 aaKnown RBP1.79□□□□□ -2.12
TRAV28-201ENST00000557548 LINC01554Q52M75 96 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 MEIG1Q5JSS6 88 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 LGALS9CQ6DKI2 356 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 Q6ZQT7 251 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 HIST3H2BBQ8N257 126 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 OR5D16Q8NGK9 328 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 OR8D4Q8NGM9 314 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 OR5H6Q8NGV6 325 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 STAG3L4Q8TBR4 150 aa1.79□□□□□ -2.12
TRAV28-201ENST00000557548 NAT14Q8WUY8 206 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms