RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 APOBEC3AP31941 199 aaPredicted RBP8.93□□□□□ -0.98
SRP54-213ENST00000556994 GFRALQ6UXV0 394 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 Q8TAT8 98 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 THYN1Q9P016 225 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 ZNF292O60281 2723 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 IGHV3OR16-8A0A075B7F1 116 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 A0A1B0GW15 77 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 GAGE10A6NGK3 116 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 NPIPB5A8MRT5 1133 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 ORMDL3Q8N138 153 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 LYPD1Q8N2G4 141 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 RAB37Q96AX2 223 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 AAMDCQ9H7C9 122 aa8.93□□□□□ -0.98
SRP54-213ENST00000556994 NPYP01303 97 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 PPBPP02775 128 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 EGR2P11161 476 aaPredicted RBP8.92□□□□□ -0.98
SRP54-213ENST00000556994 S100A7P31151 101 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 CKS2P33552 79 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 TWIST1Q15672 202 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 Q6AWC8 147 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 PCP2Q8IVA1 136 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 ABHD17AQ96GS6 310 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 WNK2Q9Y3S1 2297 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 IGHV3-35A0A0C4DH35 117 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 WI2-2373I1.2A0A1W2PRP0 233 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 LY6LH3BQJ8 138 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 H3BUT2 72 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 SAP30O75446 220 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 LY6HO94772 140 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 HLA-DMBP28068 263 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 NMUP48645 174 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 ZNF80P51504 273 aaPredicted RBP8.92□□□□□ -0.98
SRP54-213ENST00000556994 HES1Q14469 280 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 C18orf15Q96N68 181 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 JMJD8Q96S16 334 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 MSRB1Q9NZV6 116 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 DKK2Q9UBU2 259 aa8.92□□□□□ -0.98
SRP54-213ENST00000556994 ZFHX2Q9C0A1 2572 aaPredicted RBP8.91□□□□□ -0.98
SRP54-213ENST00000556994 GAS8-AS1O95177 125 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 RPS20P60866 119 aaKnown RBP8.91□□□□□ -0.98
SRP54-213ENST00000556994 SEC11AP67812 179 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 KLRD1Q13241 179 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 PRR30Q53SZ7 412 aaPredicted RBP8.91□□□□□ -0.98
SRP54-213ENST00000556994 JKAMPQ9P055 326 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 U3KQK5 164 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 NBR2O15453 112 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 HBDP02042 147 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 LGALS9BQ3B8N2 356 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 TM4SF20Q53R12 229 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 LGALS9CQ6DKI2 356 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 BOD1L2Q8IYS8 172 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 AP1S3Q96PC3 154 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 VGLL1Q99990 258 aa8.91□□□□□ -0.98
SRP54-213ENST00000556994 A1L4Q6 167 aa8.9□□□□□ -0.98
SRP54-213ENST00000556994 SMAD7O15105 426 aaKnown RBP8.9□□□□□ -0.98
SRP54-213ENST00000556994 PAX8Q06710 450 aa8.9□□□□□ -0.98
SRP54-213ENST00000556994 KIR3DS1Q14943 382 aa8.9□□□□□ -0.98
SRP54-213ENST00000556994 IGF2-ASQ6U949 168 aa8.9□□□□□ -0.98
SRP54-213ENST00000556994 IFI27L1Q96BM0 104 aa8.9□□□□□ -0.98
SRP54-213ENST00000556994 FANCD2OSQ96PS1 177 aa8.9□□□□□ -0.98
SRP54-213ENST00000556994 PRR25Q96S07 402 aa8.9□□□□□ -0.98
SRP54-213ENST00000556994 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.89□□□□□ -0.99
SRP54-213ENST00000556994 F8W735 103 aaPredicted RBP8.89□□□□□ -0.99
SRP54-213ENST00000556994 NDUFS7O75251 213 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 LINC01560Q8TB33 94 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 MEGF9Q9H1U4 602 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 MED13LQ71F56 2210 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 C9orf118A6NHY6 69 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 B9A039 149 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 PPIFP30405 207 aaKnown RBP8.89□□□□□ -0.99
SRP54-213ENST00000556994 ZNF575Q86XF7 245 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 TTTY13Q9BZ97 58 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 ZFHX3Q15911 3703 aa8.89□□□□□ -0.99
SRP54-213ENST00000556994 ORM1P02763 201 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 MFAP4P55083 255 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 NDPQ00604 133 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 PDE6HQ13956 83 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 Q8NA96 180 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 OR1N2Q8NGR9 330 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 RNF5Q99942 180 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 CACNA1BQ00975 2339 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 A0A0G2JLM5 398 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 A6NDN8 102 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 NCBP2LA6PVI3 153 aaKnown RBP8.88□□□□□ -0.99
SRP54-213ENST00000556994 H3BRM9 83 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 K7ERU9 68 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 EVI2AP22794 236 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 RIPPLY3P57055 190 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 UFSP1Q6NVU6 142 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 ADAMTSL5Q6ZMM2 481 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 CFHR4Q92496 578 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 DPF1Q92782 380 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 SRSF8Q9BRL6 282 aaKnown RBP8.88□□□□□ -0.99
SRP54-213ENST00000556994 DPM3Q9P2X0 92 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 SMAD5-AS1Q9Y6J3 95 aa8.88□□□□□ -0.99
SRP54-213ENST00000556994 IGLV11-55A0A075B6I3 123 aa8.87□□□□□ -0.99
SRP54-213ENST00000556994 IGHG4P01861 327 aa8.87□□□□□ -0.99
SRP54-213ENST00000556994 CD3EP07766 207 aa8.87□□□□□ -0.99
SRP54-213ENST00000556994 ERCC8Q13216 396 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms