RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CACNA1CQ13936 2221 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 ASXL3Q9C0F0 2248 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 PCF11O94913 1555 aaKnown RBP-0.08□□□□□ -2.42
SRP54-207ENST00000555535 TANC1Q9C0D5 1861 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 PIK3C2AO00443 1686 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 TTC28Q96AY4 2481 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 WNK2Q9Y3S1 2297 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 G3V2T6 193 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 SPINK1P00995 79 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 CAV3P56539 151 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 ZNF56Q15929 161 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 FOXI2Q6ZQN5 318 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 ZCCHC23Q6ZST2 131 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 OR2J1Q9GZK6 312 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 NAT8BQ9UHF3 227 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 MED13LQ71F56 2210 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 RFX7Q2KHR2 1363 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 KDM6BO15054 1643 aa-0.09□□□□□ -2.42
SRP54-207ENST00000555535 MYO7AQ13402 2215 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 MAP2P11137 1827 aaKnown RBP-0.1□□□□□ -2.43
SRP54-207ENST00000555535 USP54Q70EL1 1684 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 RREB1Q92766 1687 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 ANK2Q01484 3957 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 A0A087WSZ3 146 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 C3orf85A0A1B0GTC6 90 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 LYRM1O43325 122 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 HIST1H2BKO60814 126 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 SULT1C4O75897 302 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 HAND1O96004 215 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 IFNA4P05014 189 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 HIST1H2BJP06899 126 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 RPS3P23396 243 aaKnown RBP eCLIP-0.1□□□□□ -2.43
SRP54-207ENST00000555535 SNRPD3P62318 126 aaKnown RBP-0.1□□□□□ -2.43
SRP54-207ENST00000555535 GNG5P63218 68 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 GLYATL3Q5SZD4 288 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 PAIP2Q9BPZ3 127 aaKnown RBP-0.1□□□□□ -2.43
SRP54-207ENST00000555535 LPAR5Q9H1C0 372 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 SS18L2Q9UHA2 77 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 ARL2BPQ9Y2Y0 163 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 BDP1A6H8Y1 2624 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 F8P00451 2351 aa-0.1□□□□□ -2.43
SRP54-207ENST00000555535 MYH9P35579 1960 aaKnown RBP-0.1□□□□□ -2.43
SRP54-207ENST00000555535 FRMPD1Q5SYB0 1578 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 IGSF10Q6WRI0 2623 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 CAMSAP1Q5T5Y3 1602 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 TRPM1Q7Z4N2 1603 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 LOC107984156A0A0G2JMH3 177 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 C5orf58C9J3I9 102 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 NDUFC2O95298 119 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 IFNA14P01570 189 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 TRGC2P03986 189 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 PHBP35232 272 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 PPP1R2P41236 205 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 POU6F1Q14863 301 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 ASB16-AS1Q495Z4 193 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 LINC00299Q6ZSB3 139 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 CROCCP2Q86T23 111 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 ARL17AQ8IVW1 177 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 FAM216BQ8N7L0 139 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 C5orf17Q8NAS9 161 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 PLEKHB2Q96CS7 222 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 LINC00208Q96KT6 92 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 CEP19Q96LK0 163 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 TEX37Q96LM6 180 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 AP1S3Q96PC3 154 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 CST11Q9H112 138 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 PARVBQ9HBI1 364 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 ASB4Q9Y574 426 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 HELZP42694 1942 aaKnown RBP-0.11□□□□□ -2.43
SRP54-207ENST00000555535 F5P12259 2224 aa-0.11□□□□□ -2.43
SRP54-207ENST00000555535 DSPPQ9NZW4 1301 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 FER1L6Q2WGJ9 1857 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 COL7A1Q02388 2944 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 TNS1Q9HBL0 1735 aaKnown RBP-0.12□□□□□ -2.43
SRP54-207ENST00000555535 LOC101927531A0A1B0GV80 90 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 RIIAD1A6NNX1 92 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 CYBAP13498 195 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 PDE6GP18545 87 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 OGNP20774 298 aaKnown RBP-0.12□□□□□ -2.43
SRP54-207ENST00000555535 HSPE1P61604 102 aaKnown RBP-0.12□□□□□ -2.43
SRP54-207ENST00000555535 IQCJQ1A5X6 159 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 HACD4Q5VWC8 232 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 ANGPTL5Q86XS5 388 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 C10orf111Q8N326 155 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 OR4C12Q96R67 309 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 GPX7Q96SL4 187 aaPredicted RBP-0.12□□□□□ -2.43
SRP54-207ENST00000555535 EFCAB11Q9BUY7 163 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 PBDC1Q9BVG4 233 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 PROK2Q9HC23 129 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 ARMC1Q9NVT9 282 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 SLC22A13Q9Y226 551 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 TPRKBQ9Y3C4 175 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 NCAPD3P42695 1498 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 CAMSAP2Q08AD1 1489 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 PLB1Q6P1J6 1458 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 ADGBQ8N7X0 1667 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 DOCK11Q5JSL3 2073 aa-0.12□□□□□ -2.43
SRP54-207ENST00000555535 UHRF1BP1Q6BDS2 1440 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 CD109Q6YHK3 1445 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 DLEC1Q9Y238 1755 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms