RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 MRPL36Q9P0J6 103 aaKnown RBP8.63□□□□□ -1.03
SHMT2-216ENST00000554975 KLF12Q9Y4X4 402 aa8.63□□□□□ -1.03
SHMT2-216ENST00000554975 HUWE1Q7Z6Z7 4374 aaKnown RBP8.63□□□□□ -1.03
SHMT2-216ENST00000554975 TRAV5A0A0B4J249 113 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 H3BRN7 92 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 K7EIM0 57 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 SLC17A3O00476 420 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 GNG7O60262 68 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 IGLV2-8P01709 118 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 RD3LP0DJH9 198 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 PSG1P11464 419 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 TMEM11P17152 192 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 FCGR2BP31994 310 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-216ENST00000554975 ADMP35318 185 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 PKIAP61925 76 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 CTAG1AP78358 180 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 Q0VG73 95 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 OR10J3Q5JRS4 329 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 GFI1BQ5VTD9 330 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 MORN5Q5VZ52 161 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 TMEM219Q86XT9 240 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 Q8N6K4 173 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 RITA1Q96K30 269 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 SLC25A39Q9BZJ4 359 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-216ENST00000554975 NPFFR1Q9GZQ6 430 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 Q9H3A6 140 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 ZNF702PQ9H963 129 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 NAT8BQ9UHF3 227 aa8.62□□□□□ -1.03
SHMT2-216ENST00000554975 IGLV11-55A0A075B6I3 123 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 A0A1W2PRX2 142 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 FAM231BA6NCW3 169 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 HLA-DRB1P01911 266 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 FAM106CPP0CH98 169 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 CBLN1P23435 193 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 RAB9AP51151 201 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 OR5I1Q13606 314 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 LDLRAD2Q5SZI1 272 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 ZNF600Q6ZNG1 722 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 TTC9CQ8N5M4 171 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 TSKUQ8WUA8 353 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 RNF125Q96EQ8 232 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 GFRA4Q9GZZ7 299 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 U3KQK5 164 aa8.61□□□□□ -1.03
SHMT2-216ENST00000554975 STARD9Q9P2P6 4700 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 PGPA6NDG6 321 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 A8MWL6 223 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 C3orf84H3BNL1 204 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 TCRAP04437 139 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 Q86TA4 180 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 TMEM75Q8N9X5 138 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 PIFOQ8TCI5 191 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 BLNKQ8WV28 456 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 DAZAP1Q96EP5 407 aaKnown RBP8.6□□□□□ -1.03
SHMT2-216ENST00000554975 NOL4LQ96MY1 436 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-216ENST00000554975 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
SHMT2-216ENST00000554975 RPP21Q9H633 154 aaKnown RBP8.6□□□□□ -1.03
SHMT2-216ENST00000554975 AAMDCQ9H7C9 122 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 C21orf62Q9NYP8 219 aa8.6□□□□□ -1.03
SHMT2-216ENST00000554975 MRPL27Q9P0M9 148 aaKnown RBP8.6□□□□□ -1.03
SHMT2-216ENST00000554975 A6NDX4 124 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 ZNF253O75346 499 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 LTAP01374 205 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 IGKV1-17P01599 117 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 IGHV3-48P01763 117 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 RPL7P18124 248 aaKnown RBP8.59□□□□□ -1.03
SHMT2-216ENST00000554975 CD24P25063 80 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 EGFEM1PQ0D2K5 195 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 CASC10Q5T4H9 136 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 Q6AWC8 147 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 Q6ZS46 218 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 BAGE3Q86Y29 109 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 VN1R17PQ8TDU5 208 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 ATP6V0BQ99437 205 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 ZFP30Q9Y2G7 519 aa8.59□□□□□ -1.03
SHMT2-216ENST00000554975 NCBP2LA6PVI3 153 aaKnown RBP8.58□□□□□ -1.04
SHMT2-216ENST00000554975 P01737 135 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 IL4P05112 153 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 APELAP0DMC3 54 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 CSN1S1P47710 185 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 RAB4BP61018 213 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 PSG9Q00887 426 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 KLK9Q2XQG4 91 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 TMEM95Q3KNT9 176 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 Q56UQ5 140 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 DMRTA1Q5VZB9 504 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 TMEM136Q6ZRR5 245 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 Q8N2B8 174 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 PRSS22Q9GZN4 317 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 ZNF586Q9NXT0 402 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 KLK9Q9UKQ9 250 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 HYDINQ4G0P3 5121 aa8.58□□□□□ -1.04
SHMT2-216ENST00000554975 TRBV19A0A075B6N1 114 aa8.57□□□□□ -1.04
SHMT2-216ENST00000554975 A0A1B0GW15 77 aa8.57□□□□□ -1.04
SHMT2-216ENST00000554975 LINC00587B1AMM8 73 aa8.57□□□□□ -1.04
SHMT2-216ENST00000554975 BMPR1BO00238 502 aa8.57□□□□□ -1.04
SHMT2-216ENST00000554975 NDUFB8O95169 186 aa8.57□□□□□ -1.04
SHMT2-216ENST00000554975 GZMBP10144 247 aa8.57□□□□□ -1.04
SHMT2-216ENST00000554975 GNG5P63218 68 aa8.57□□□□□ -1.04
SHMT2-216ENST00000554975 KCNS1Q96KK3 526 aa8.57□□□□□ -1.04
SHMT2-216ENST00000554975 MS4A10Q96PG2 267 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms