RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TUBA4BQ9H853 241 aa12.17□□□□□ -0.46
SPTLC2-203ENST00000554901 SRD5A3Q9H8P0 318 aa12.17□□□□□ -0.46
SPTLC2-203ENST00000554901 A0A0J9YX75 114 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 PRB2P02812 416 aaPredicted RBP12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 HLA-DRB4P13762 266 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 HLA-DMBP28068 263 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 CSN1S1P47710 185 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 STHQ8IWL8 128 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 LYPD6BQ8NI32 183 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 CITED4Q96RK1 184 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 HLA-DRB4X5D2U9 266 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 PGPA6NDG6 321 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 DUSP14O95147 198 aaKnown RBP12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 ACTL10Q5JWF8 245 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 CMTM2Q8TAZ6 248 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 TCEAL7Q9BRU2 100 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 MANBALQ9NQG1 85 aa12.16□□□□□ -0.46
SPTLC2-203ENST00000554901 FAM74A7A6NL05 159 aa12.15□□□□□ -0.46
SPTLC2-203ENST00000554901 H3BMM0 161 aa12.15□□□□□ -0.46
SPTLC2-203ENST00000554901 M0R3E3 92 aa12.15□□□□□ -0.46
SPTLC2-203ENST00000554901 DEFA6Q01524 100 aa12.15□□□□□ -0.46
SPTLC2-203ENST00000554901 ZNF124Q15973 351 aa12.15□□□□□ -0.46
SPTLC2-203ENST00000554901 C5orf17Q8NAS9 161 aa12.15□□□□□ -0.46
SPTLC2-203ENST00000554901 OR8A1Q8NGG7 326 aa12.15□□□□□ -0.46
SPTLC2-203ENST00000554901 MEGF8Q7Z7M0 2845 aa12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 SERTM2A0A1B0GWG4 89 aa12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 KNCNA6PVL3 124 aa12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 A8MTW9 85 aa12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 ZNF705FA8MVS1 300 aaPredicted RBP12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 GGTLC3B5MD39 225 aa12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 TAGLN2P37802 199 aaKnown RBP12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 SUMO1P63165 101 aaKnown RBP12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 LINC00322Q6ZN03 302 aaPredicted RBP12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 ZNF767PQ75MW2 155 aa12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 TRPT1Q86TN4 253 aaKnown RBP12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 OR10J6PQ8NGY7 276 aa12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 TXNDC17Q9BRA2 123 aa12.14□□□□□ -0.47
SPTLC2-203ENST00000554901 LOC102724200A0A096LPH7 203 aaPredicted RBP12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 KIR2DL5BA0A0G2JN68 375 aa12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 KIR2DL5BA0A0G2JPC4 375 aa12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 A0A1B0GV50 99 aa12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 RBAKDNA6NC62 111 aa12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 IFNA1P01562 189 aa12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 SLC25A5P05141 298 aaKnown RBP12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 CCL20P78556 96 aa12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 KIR2DL5AQ8N109 375 aa12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 KIR2DL5BQ8NHK3 375 aa12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 MRAPQ8TCY5 172 aa12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 YTHDF2Q9Y5A9 579 aaKnown RBP12.13□□□□□ -0.47
SPTLC2-203ENST00000554901 F6UB75 175 aa12.12□□□□□ -0.47
SPTLC2-203ENST00000554901 UBE2G2P60604 165 aa12.12□□□□□ -0.47
SPTLC2-203ENST00000554901 NUTF2P61970 127 aaKnown RBP12.12□□□□□ -0.47
SPTLC2-203ENST00000554901 GDF5OSQ5U4N7 250 aa12.12□□□□□ -0.47
SPTLC2-203ENST00000554901 MORN3Q6PF18 240 aaPredicted RBP12.12□□□□□ -0.47
SPTLC2-203ENST00000554901 GNG13Q9P2W3 67 aa12.12□□□□□ -0.47
SPTLC2-203ENST00000554901 FBN3Q75N90 2809 aa12.12□□□□□ -0.47
SPTLC2-203ENST00000554901 RBMY1BA6NDE4 496 aaKnown RBP12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 RBMY1EA6NEQ0 496 aaKnown RBP12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 DIRC3C9JPN6 131 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 PRAC2D3DTV9 90 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 NPIPB6E9PJ23 425 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 PAGE4O60829 102 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 RBMY1DP0C7P1 496 aaKnown RBP12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 FRMD6-AS1P0C7T7 363 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 CNN1P51911 297 aaKnown RBP12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 APOC4P55056 127 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 DEFB1P60022 68 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 DEFB121Q5J5C9 76 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 CST9LP1Q5W188 147 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 CCDC28AQ8IWP9 274 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 HIST1H2BAQ96A08 127 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 EPDR1Q9UM22 224 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 K7EQM0 130 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 HIST1H1AQ02539 215 aaPredicted RBP12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 C9orf47Q6ZRZ4 202 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 OR4B1Q8NGF8 309 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 LINC00477Q96M19 166 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 ODF3Q96PU9 254 aa12.11□□□□□ -0.47
SPTLC2-203ENST00000554901 FBLL1A6NHQ2 334 aaKnown RBP12.1□□□□□ -0.47
SPTLC2-203ENST00000554901 F6UZH7 168 aa12.1□□□□□ -0.47
SPTLC2-203ENST00000554901 UBE2CO00762 179 aa12.1□□□□□ -0.47
SPTLC2-203ENST00000554901 TCRAP04437 139 aa12.1□□□□□ -0.47
SPTLC2-203ENST00000554901 NMBP08949 121 aa12.1□□□□□ -0.47
SPTLC2-203ENST00000554901 RAB14P61106 215 aa12.1□□□□□ -0.47
SPTLC2-203ENST00000554901 IFITM2Q01629 132 aa12.1□□□□□ -0.47
SPTLC2-203ENST00000554901 ATG101Q9BSB4 218 aa12.1□□□□□ -0.47
SPTLC2-203ENST00000554901 C11orf94C9JXX5 98 aa12.09□□□□□ -0.47
SPTLC2-203ENST00000554901 BCL2P10415 239 aa12.09□□□□□ -0.47
SPTLC2-203ENST00000554901 TMEM78Q5T7P6 136 aa12.09□□□□□ -0.47
SPTLC2-203ENST00000554901 CYB561D1Q8N8Q1 229 aa12.09□□□□□ -0.47
SPTLC2-203ENST00000554901 CSTL1Q9H114 145 aa12.09□□□□□ -0.47
SPTLC2-203ENST00000554901 PPP1R14DQ9NXH3 145 aa12.09□□□□□ -0.47
SPTLC2-203ENST00000554901 IGKV2-40A0A087WW87 121 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 TRBV7-9A0A0J9YWB2 115 aa12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 IGKV2D-40P01614 121 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 AMBPP02760 352 aa12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 ZNF705DP0CH99 300 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 ZNF705BP0CI00 300 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 RPL35AP18077 110 aaKnown RBP12.08□□□□□ -0.48
SPTLC2-203ENST00000554901 ATP5G3P48201 142 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms