RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SYS1-DBNDD2H3BUS1 97 aa12.27□□□□□ -0.45
ARHGEF40-203ENST00000554514 DLEU1O43261 78 aa12.27□□□□□ -0.45
ARHGEF40-203ENST00000554514 MRPL52Q86TS9 123 aaKnown RBP12.27□□□□□ -0.45
ARHGEF40-203ENST00000554514 NEU4Q8WWR8 484 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF40-203ENST00000554514 IGHV3OR16-13A0A075B7E8 117 aa12.26□□□□□ -0.45
ARHGEF40-203ENST00000554514 IGHV3-74A0A0B4J1X5 117 aa12.26□□□□□ -0.45
ARHGEF40-203ENST00000554514 TMEM213A2RRL7 107 aa12.26□□□□□ -0.45
ARHGEF40-203ENST00000554514 NPIPB5A8MRT5 1133 aa12.26□□□□□ -0.45
ARHGEF40-203ENST00000554514 CHCHD1Q96BP2 118 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-203ENST00000554514 NDFIP1Q9BT67 221 aa12.26□□□□□ -0.45
ARHGEF40-203ENST00000554514 FAM162BQ5T6X4 162 aa12.26□□□□□ -0.45
ARHGEF40-203ENST00000554514 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
ARHGEF40-203ENST00000554514 CCDC144NLQ6NUI1 221 aa12.26□□□□□ -0.45
ARHGEF40-203ENST00000554514 OVOL3O00110 214 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 GPR183P32249 361 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 LYZL1Q6UWQ5 148 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 LYPD1Q8N2G4 141 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 TMEM189A5PLL7 270 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 SH2D1AO60880 128 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 FXYD7P58549 80 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 LY6DQ14210 128 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 TTC9CQ8N5M4 171 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 THYN1Q9P016 225 aa12.25□□□□□ -0.45
ARHGEF40-203ENST00000554514 IGHV7-81A0A0B4J1V7 117 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 CIDEAO60543 219 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 S100A7P31151 101 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 PRSS3P2Q8NHM4 247 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 VGLL1Q99990 258 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 COL12A1Q99715 3063 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 CTSGP08311 255 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 FAM106CPP0CH98 169 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 FAM106AQ4KMX7 169 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 MAP1LC3CQ9BXW4 147 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 RABAC1Q9UI14 185 aa12.24□□□□□ -0.45
ARHGEF40-203ENST00000554514 IGHV3-49A0A0A0MS15 119 aa12.23□□□□□ -0.45
ARHGEF40-203ENST00000554514 EGR2P11161 476 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-203ENST00000554514 UNQ5815/PRO19632Q6UWF5 114 aa12.23□□□□□ -0.45
ARHGEF40-203ENST00000554514 AMN1Q8IY45 258 aa12.23□□□□□ -0.45
ARHGEF40-203ENST00000554514 VPS13CQ709C8 3753 aa12.23□□□□□ -0.45
ARHGEF40-203ENST00000554514 TRBV6-1A0A0K0K1D8 114 aa12.23□□□□□ -0.45
ARHGEF40-203ENST00000554514 C20orf202A1L168 122 aa12.23□□□□□ -0.45
ARHGEF40-203ENST00000554514 FA2HQ7L5A8 372 aa12.23□□□□□ -0.45
ARHGEF40-203ENST00000554514 S100A7AQ86SG5 101 aa12.23□□□□□ -0.45
ARHGEF40-203ENST00000554514 D6R8Y8 96 aa12.22□□□□□ -0.45
ARHGEF40-203ENST00000554514 OR5AL1P0C617 328 aa12.22□□□□□ -0.45
ARHGEF40-203ENST00000554514 RPL7P18124 248 aaKnown RBP12.22□□□□□ -0.45
ARHGEF40-203ENST00000554514 C15orf32Q32M92 178 aa12.22□□□□□ -0.45
ARHGEF40-203ENST00000554514 AP5S1Q9NUS5 200 aa12.22□□□□□ -0.45
ARHGEF40-203ENST00000554514 CELSR1Q9NYQ6 3014 aa12.22□□□□□ -0.45
ARHGEF40-203ENST00000554514 IGHV3OR16-10A0A075B7F0 116 aa12.22□□□□□ -0.45
ARHGEF40-203ENST00000554514 IFI27P40305 119 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF40-203ENST00000554514 SMAD5-AS1Q9Y6J3 95 aa12.22□□□□□ -0.45
ARHGEF40-203ENST00000554514 SMKR1H3BMG3 65 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 ZNF207O43670 478 aaKnown RBP12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 TCTAP57738 103 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 PSG9Q00887 426 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 ERCC8Q13216 396 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 PDE6HQ13956 83 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 RNF182Q8N6D2 247 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 Q8N6K4 173 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 Q8N9W7 124 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 LINC01548A6NM66 108 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 G3V318 75 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 ZNF80P51504 273 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 LOXL1Q08397 574 aaPredicted RBP12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 ERASQ7Z444 233 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 TMEM191AQ9H0A3 160 aa12.21□□□□□ -0.45
ARHGEF40-203ENST00000554514 MAP1AP78559 2803 aaPredicted RBP12.21□□□□□ -0.46
ARHGEF40-203ENST00000554514 ATP6V0E1O15342 81 aa12.21□□□□□ -0.46
ARHGEF40-203ENST00000554514 CLEC3BP05452 202 aa12.21□□□□□ -0.46
ARHGEF40-203ENST00000554514 UCNP55089 124 aa12.21□□□□□ -0.46
ARHGEF40-203ENST00000554514 HSBP1L1C9JCN9 74 aa12.2□□□□□ -0.46
ARHGEF40-203ENST00000554514 SAA4P35542 130 aa12.2□□□□□ -0.46
ARHGEF40-203ENST00000554514 RHOGP84095 191 aa12.2□□□□□ -0.46
ARHGEF40-203ENST00000554514 OR8A1Q8NGG7 326 aa12.2□□□□□ -0.46
ARHGEF40-203ENST00000554514 PRR25Q96S07 402 aa12.2□□□□□ -0.46
ARHGEF40-203ENST00000554514 TWIST1Q15672 202 aa12.2□□□□□ -0.46
ARHGEF40-203ENST00000554514 SIRPDQ9H106 197 aa12.2□□□□□ -0.46
ARHGEF40-203ENST00000554514 HSPB8Q9UJY1 196 aa12.2□□□□□ -0.46
ARHGEF40-203ENST00000554514 TCF21O43680 179 aa12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 NCR2O95944 276 aa12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 ORM1P02763 201 aa12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 CLEC19AQ6UXS0 136 aa12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 BPESC1Q9GZL8 116 aa12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 LINC00527Q9UJ94 153 aa12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 SNAI2O43623 268 aa12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 MINOS1Q5TGZ0 78 aa12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 MRPS16Q9Y3D3 137 aaKnown RBP12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 MINOS1-NBL1R4GNA1 71 aa12.19□□□□□ -0.46
ARHGEF40-203ENST00000554514 PRAC2D3DTV9 90 aa12.18□□□□□ -0.46
ARHGEF40-203ENST00000554514 CRXO43186 299 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF40-203ENST00000554514 PPIFP30405 207 aaKnown RBP12.18□□□□□ -0.46
ARHGEF40-203ENST00000554514 DTX2Q86UW9 622 aa12.18□□□□□ -0.46
ARHGEF40-203ENST00000554514 TMEM219Q86XT9 240 aa12.18□□□□□ -0.46
ARHGEF40-203ENST00000554514 COL25A1Q9BXS0 654 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF40-203ENST00000554514 SCGB2A1O75556 95 aa12.18□□□□□ -0.46
ARHGEF40-203ENST00000554514 PRELID3AQ96N28 172 aa12.18□□□□□ -0.46
ARHGEF40-203ENST00000554514 ZNF48Q96MX3 618 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 IGHG4P01861 327 aa12.17□□□□□ -0.46
ARHGEF40-203ENST00000554514 RBX1P62877 108 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms