RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 CLUHP3Q96NS8 147 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 CITED1Q99966 193 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 CITED2Q99967 270 aaPredicted RBP8.23□□□□□ -1.09
PABPN1-203ENST00000553960 OSTCQ9NRP0 149 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 ATRQ13535 2644 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 TRAV9-1A0A075B6T8 112 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 ZNF320A2RRD8 509 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 A8MTW9 85 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 M0QZ24 198 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 MT-ND4LP03901 98 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 CSN3P07498 182 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 FOLR2P14207 255 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 AKR1C3P42330 323 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 GNG4P50150 75 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 SYNJ2BPP57105 145 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 AWAT1Q58HT5 328 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 CT83Q5H943 113 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 SAPCD1Q5SSQ6 148 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 LCN12Q6JVE5 192 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 ADAMTSL5Q6ZMM2 481 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 OCC1Q8TAD7 63 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 ODF3Q96PU9 254 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 DERL1Q9BUN8 251 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 SMCO4Q9NRQ5 59 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 ZNF492Q9P255 531 aa8.22□□□□□ -1.09
PABPN1-203ENST00000553960 FAM231BA6NCW3 169 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 CYSRT1A8MQ03 144 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 K7EQG2 157 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 OVOL1O14753 267 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 ID1P41134 155 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 FLI1Q01543 452 aaPredicted RBP8.21□□□□□ -1.1
PABPN1-203ENST00000553960 ATRAIDQ6UW56 229 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 APRG1Q8IVJ8 170 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 EXOC3-AS1Q8N2X6 119 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 DLX4Q92988 240 aaPredicted RBP8.21□□□□□ -1.1
PABPN1-203ENST00000553960 BTF3L4Q96K17 158 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 LINC00477Q96M19 166 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 YPEL4Q96NS1 127 aa8.21□□□□□ -1.1
PABPN1-203ENST00000553960 TEP1Q99973 2627 aaKnown RBP8.21□□□□□ -1.1
PABPN1-203ENST00000553960 NPIPB6E9PJ23 425 aa8.2□□□□□ -1.1
PABPN1-203ENST00000553960 WIPF1O43516 503 aa8.2□□□□□ -1.1
PABPN1-203ENST00000553960 INSL3P51460 131 aa8.2□□□□□ -1.1
PABPN1-203ENST00000553960 SRSF2Q01130 221 aaKnown RBP8.2□□□□□ -1.1
PABPN1-203ENST00000553960 CENPWQ5EE01 88 aa8.2□□□□□ -1.1
PABPN1-203ENST00000553960 C18orf65Q6ZTR6 163 aa8.2□□□□□ -1.1
PABPN1-203ENST00000553960 Q71RC1 249 aaPredicted RBP8.2□□□□□ -1.1
PABPN1-203ENST00000553960 TCF24Q7RTU0 167 aa8.2□□□□□ -1.1
PABPN1-203ENST00000553960 BAGE2Q86Y30 109 aa8.2□□□□□ -1.1
PABPN1-203ENST00000553960 OR5B12Q96R08 314 aa8.2□□□□□ -1.1
PABPN1-203ENST00000553960 PYGO2Q9BRQ0 406 aa8.2□□□□□ -1.1
PABPN1-203ENST00000553960 TRBV24-1A0A075B6N3 115 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 DNASE2O00115 360 aaPredicted RBP8.19□□□□□ -1.1
PABPN1-203ENST00000553960 CMC4P56277 68 aaPredicted RBP8.19□□□□□ -1.1
PABPN1-203ENST00000553960 KRTAP10-3P60369 221 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 UBE2G1P62253 170 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 PAFAH1B2P68402 229 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 DEFB114Q30KQ6 69 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 Q86TA4 180 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 WFDC9Q8NEX5 89 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 SFRP2Q96HF1 295 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 FAM19A4Q96LR4 140 aa8.19□□□□□ -1.1
PABPN1-203ENST00000553960 SPAG8Q99932 426 aaPredicted RBP8.19□□□□□ -1.1
PABPN1-203ENST00000553960 IGHV3OR16-8A0A075B7F1 116 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 K7EN84 100 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 M0R036 132 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 M0R3E3 92 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 ZNF207O43670 478 aaKnown RBP8.18□□□□□ -1.1
PABPN1-203ENST00000553960 CRISP2P16562 243 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 SLURP1P55000 103 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 FOXA3P55318 350 aaPredicted RBP8.18□□□□□ -1.1
PABPN1-203ENST00000553960 GOLT1AQ6ZVE7 132 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 C15orf54Q8N8G6 183 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 OR4B1Q8NGF8 309 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 C16orf92Q96LL3 132 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 PRR25Q96S07 402 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 MS4A6AQ9H2W1 248 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 PSG8Q9UQ74 426 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 CUBNO60494 3623 aa8.18□□□□□ -1.1
PABPN1-203ENST00000553960 IGLV1-51P01701 117 aa8.17□□□□□ -1.1
PABPN1-203ENST00000553960 PFN1P07737 140 aaKnown RBP8.17□□□□□ -1.1
PABPN1-203ENST00000553960 SNRPD3P62318 126 aaKnown RBP8.17□□□□□ -1.1
PABPN1-203ENST00000553960 ZNF674Q2M3X9 581 aa8.17□□□□□ -1.1
PABPN1-203ENST00000553960 DEFB136Q30KP8 78 aa8.17□□□□□ -1.1
PABPN1-203ENST00000553960 RNF212Q495C1 297 aa8.17□□□□□ -1.1
PABPN1-203ENST00000553960 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.17□□□□□ -1.1
PABPN1-203ENST00000553960 LINC00482Q8N8I6 264 aa8.17□□□□□ -1.1
PABPN1-203ENST00000553960 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
PABPN1-203ENST00000553960 ZNF747Q9BV97 191 aa8.17□□□□□ -1.1
PABPN1-203ENST00000553960 GFRA4Q9GZZ7 299 aa8.17□□□□□ -1.1
PABPN1-203ENST00000553960 SAV1Q9H4B6 383 aaPredicted RBP8.17□□□□□ -1.1
PABPN1-203ENST00000553960 WNK1Q9H4A3 2382 aa8.17□□□□□ -1.1
PABPN1-203ENST00000553960 CXCL1P09341 107 aa8.16□□□□□ -1.1
PABPN1-203ENST00000553960 ZNF138P52744 262 aa8.16□□□□□ -1.1
PABPN1-203ENST00000553960 CEBPGP53567 150 aa8.16□□□□□ -1.1
PABPN1-203ENST00000553960 GNG5P63218 68 aa8.16□□□□□ -1.1
PABPN1-203ENST00000553960 ADIRFQ15847 76 aa8.16□□□□□ -1.1
PABPN1-203ENST00000553960 OR10G8Q8NGN5 311 aa8.16□□□□□ -1.1
PABPN1-203ENST00000553960 RPS10P5Q9NQ39 176 aa8.16□□□□□ -1.1
PABPN1-203ENST00000553960 ZNF256Q9Y2P7 627 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms