RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 PRO1933Q9H354 126 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 OTORQ9NRC9 128 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 MYO9AB2RTY4 2548 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 TRBV7-1A0A0A6YYK4 115 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 M0QZK8 103 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 SLC35B1P78383 322 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 TMEM183BQ1AE95 376 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 LINC00322Q6ZN03 302 aaPredicted RBP9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 SERTAD4Q9NUC0 356 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 LY96Q9Y6Y9 160 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 AP4M1O00189 453 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 BMPR1BO00238 502 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 GGCTO75223 188 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 SRP14P37108 136 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 UNQ9165/PRO28630Q6UXU0 137 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 DAZAP1Q96EP5 407 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST1H2BKO60814 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST1H2BJP06899 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST1H2BOP23527 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST1H2BBP33778 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST1H2BDP58876 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST1H2BCP62807 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST2H2BEQ16778 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 IBA57Q5T440 356 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 Q6YL49 198 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST1H2BHQ93079 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST1H2BNQ99877 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST1H2BMQ99879 126 aa9.82□□□□□ -0.84
VIPAS39-206ENST00000553888 FAM223BA6NKX1 122 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 PHOX2AO14813 284 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 IGLV2-11P01706 119 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 ARL3P36405 182 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 PRNTQ86SH4 94 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 FAM223AQ8IWN6 122 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 CMTM2Q8TAZ6 248 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 PPP1R2P9O14990 202 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 SCGB2A1O75556 95 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 TRGC1P0CF51 173 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 CFHR3Q02985 330 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 KCNIP4Q6PIL6 250 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 PRDM13Q9H4Q3 707 aa9.81□□□□□ -0.84
VIPAS39-206ENST00000553888 HIST2H2BDQ6DRA6 164 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 IL36BQ9NZH7 164 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 VPREB3Q9UKI3 123 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 KLF12Q9Y4X4 402 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 ZNF705FA8MVS1 300 aaPredicted RBP9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 BUB3O43684 328 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 IGLV1-40P01703 118 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 RAB9AP51151 201 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 NDUFA6P56556 154 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 OR4X2Q8NGF9 303 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 SRD5A3Q9H8P0 318 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 MTORP42345 2549 aa9.8□□□□□ -0.84
VIPAS39-206ENST00000553888 C5orf52A6NGY3 159 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 ZNF705GA8MUZ8 300 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 EDN2P20800 178 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 FABP9Q0Z7S8 132 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 PET117Q6UWS5 81 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 Q86TA4 180 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 SIGLECL1Q8N7X8 197 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 IGKV2-40A0A087WW87 121 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 IGKV2D-40P01614 121 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 RPL7P18124 248 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 FOXL1Q12952 345 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 PRR31Q5SQ13 230 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 GFI1BQ5VTD9 330 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 RNF182Q8N6D2 247 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 LTAP01374 205 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 IGHG4P01861 327 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 PPBPP02775 128 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 RPEL1Q2QD12 228 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 C9orf139Q6ZV77 190 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 GPR82Q96P67 336 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 OSTCQ9NRP0 149 aa9.79□□□□□ -0.84
VIPAS39-206ENST00000553888 NOTCH2Q04721 2471 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 FMC1Q96HJ9 113 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 MLST8Q9BVC4 326 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 PGPEP1Q9NXJ5 209 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 ZNF785A8K8V0 405 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 DIRC3C9JPN6 131 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 TSTD3H0UI37 97 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 OR5R1Q8NH85 324 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 IMMP2LQ96T52 175 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 ZNF702PQ9H963 129 aa9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 GAR1Q9NY12 217 aaKnown RBP9.78□□□□□ -0.84
VIPAS39-206ENST00000553888 CBLN1P23435 193 aa9.77□□□□□ -0.84
VIPAS39-206ENST00000553888 PDZD11Q5EBL8 140 aa9.77□□□□□ -0.84
VIPAS39-206ENST00000553888 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.77□□□□□ -0.85
VIPAS39-206ENST00000553888 RPLP1P05386 114 aaKnown RBP9.77□□□□□ -0.85
VIPAS39-206ENST00000553888 CRYBA4P53673 196 aa9.77□□□□□ -0.85
VIPAS39-206ENST00000553888 KRTAP1-1Q07627 177 aa9.77□□□□□ -0.85
VIPAS39-206ENST00000553888 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.77□□□□□ -0.85
VIPAS39-206ENST00000553888 C8orf49Q96NF6 230 aa9.77□□□□□ -0.85
VIPAS39-206ENST00000553888 METTL26Q96S19 204 aa9.77□□□□□ -0.85
VIPAS39-206ENST00000553888 AAMDCQ9H7C9 122 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 PRAC2D3DTV9 90 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 H0Y8G0 127 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 TYMSP04818 313 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 PSMB8P28062 276 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms