RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 A0A0J9YX75 114 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 A0A1B0GV50 99 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 A8MTW9 85 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 ZNF705FA8MVS1 300 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-208ENST00000553719 PRAC2D3DTV9 90 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 HBE1P02100 147 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 IGHV4-30-4P0DP06 118 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 BLOC1S1P78537 153 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 PMS2P11Q13670 270 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 LINC00322Q6ZN03 302 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-208ENST00000553719 IQCF2Q8IXL9 164 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 RPUSD4Q96CM3 377 aaKnown RBP13.32□□□□□ -0.28
PSEN1-208ENST00000553719 AAMDCQ9H7C9 122 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 SRD5A3Q9H8P0 318 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 PRELID1Q9Y255 219 aa13.32□□□□□ -0.28
PSEN1-208ENST00000553719 FAM74A7A6NL05 159 aa13.31□□□□□ -0.28
PSEN1-208ENST00000553719 KNCNA6PVL3 124 aa13.31□□□□□ -0.28
PSEN1-208ENST00000553719 F6UB75 175 aa13.31□□□□□ -0.28
PSEN1-208ENST00000553719 HLA-DRB4P13762 266 aa13.31□□□□□ -0.28
PSEN1-208ENST00000553719 ZNF738Q8NE65 137 aa13.31□□□□□ -0.28
PSEN1-208ENST00000553719 HLA-DRB4X5D2U9 266 aa13.31□□□□□ -0.28
PSEN1-208ENST00000553719 NMBP08949 121 aa13.3□□□□□ -0.28
PSEN1-208ENST00000553719 TRPT1Q86TN4 253 aaKnown RBP13.3□□□□□ -0.28
PSEN1-208ENST00000553719 ARL6IP6Q8N6S5 226 aa13.3□□□□□ -0.28
PSEN1-208ENST00000553719 RBMY1BA6NDE4 496 aaKnown RBP13.29□□□□□ -0.28
PSEN1-208ENST00000553719 PGPA6NDG6 321 aa13.29□□□□□ -0.28
PSEN1-208ENST00000553719 RBMY1EA6NEQ0 496 aaKnown RBP13.29□□□□□ -0.28
PSEN1-208ENST00000553719 H3BMM0 161 aa13.29□□□□□ -0.28
PSEN1-208ENST00000553719 RBMY1DP0C7P1 496 aaKnown RBP13.29□□□□□ -0.28
PSEN1-208ENST00000553719 UBE2G2P60604 165 aa13.29□□□□□ -0.28
PSEN1-208ENST00000553719 ACTL10Q5JWF8 245 aa13.29□□□□□ -0.28
PSEN1-208ENST00000553719 CCDC28AQ8IWP9 274 aa13.29□□□□□ -0.28
PSEN1-208ENST00000553719 OR8A1Q8NGG7 326 aa13.29□□□□□ -0.28
PSEN1-208ENST00000553719 CLUHP3Q96NS8 147 aa13.29□□□□□ -0.28
PSEN1-208ENST00000553719 HUWE1Q7Z6Z7 4374 aaKnown RBP13.29□□□□□ -0.28
PSEN1-208ENST00000553719 TEX46H3BTG2 121 aa13.28□□□□□ -0.28
PSEN1-208ENST00000553719 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-208ENST00000553719 PPT1P50897 306 aa13.28□□□□□ -0.28
PSEN1-208ENST00000553719 C5orf17Q8NAS9 161 aa13.28□□□□□ -0.28
PSEN1-208ENST00000553719 NKX6-2Q9C056 277 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-208ENST00000553719 DIRC3C9JPN6 131 aa13.27□□□□□ -0.29
PSEN1-208ENST00000553719 PAGE4O60829 102 aa13.27□□□□□ -0.29
PSEN1-208ENST00000553719 DEFA6Q01524 100 aa13.27□□□□□ -0.29
PSEN1-208ENST00000553719 ZNF767PQ75MW2 155 aa13.27□□□□□ -0.29
PSEN1-208ENST00000553719 RXFP4Q8TDU9 374 aa13.27□□□□□ -0.29
PSEN1-208ENST00000553719 PCNPQ8WW12 178 aaKnown RBP13.27□□□□□ -0.29
PSEN1-208ENST00000553719 MANBALQ9NQG1 85 aa13.27□□□□□ -0.29
PSEN1-208ENST00000553719 NPIPB6E9PJ23 425 aa13.26□□□□□ -0.29
PSEN1-208ENST00000553719 FRMD6-AS1P0C7T7 363 aa13.26□□□□□ -0.29
PSEN1-208ENST00000553719 ZNF705DP0CH99 300 aaPredicted RBP13.26□□□□□ -0.29
PSEN1-208ENST00000553719 ZNF705BP0CI00 300 aaPredicted RBP13.26□□□□□ -0.29
PSEN1-208ENST00000553719 ATP5G3P48201 142 aa13.26□□□□□ -0.29
PSEN1-208ENST00000553719 CNN1P51911 297 aaKnown RBP13.26□□□□□ -0.29
PSEN1-208ENST00000553719 SUMO1P63165 101 aaKnown RBP13.26□□□□□ -0.29
PSEN1-208ENST00000553719 EBLN2Q6P2I7 272 aa13.26□□□□□ -0.29
PSEN1-208ENST00000553719 AMTNQ6UX39 209 aa13.26□□□□□ -0.29
PSEN1-208ENST00000553719 RBAKDNA6NC62 111 aa13.25□□□□□ -0.29
PSEN1-208ENST00000553719 TCRAP04437 139 aa13.25□□□□□ -0.29
PSEN1-208ENST00000553719 SLC25A5P05141 298 aaKnown RBP13.25□□□□□ -0.29
PSEN1-208ENST00000553719 GNG5P63218 68 aa13.25□□□□□ -0.29
PSEN1-208ENST00000553719 HIST1H1AQ02539 215 aaPredicted RBP13.25□□□□□ -0.29
PSEN1-208ENST00000553719 STHQ8IWL8 128 aa13.25□□□□□ -0.29
PSEN1-208ENST00000553719 TCEAL7Q9BRU2 100 aa13.25□□□□□ -0.29
PSEN1-208ENST00000553719 GNG13Q9P2W3 67 aa13.25□□□□□ -0.29
PSEN1-208ENST00000553719 EPDR1Q9UM22 224 aa13.25□□□□□ -0.29
PSEN1-208ENST00000553719 IGKV2-40A0A087WW87 121 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-208ENST00000553719 LOC102724200A0A096LPH7 203 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-208ENST00000553719 DUSP14O95147 198 aaKnown RBP13.24□□□□□ -0.29
PSEN1-208ENST00000553719 IGKV2D-40P01614 121 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-208ENST00000553719 GIG44P09565 113 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-208ENST00000553719 BCL2P10415 239 aa13.24□□□□□ -0.29
PSEN1-208ENST00000553719 CSN1S1P47710 185 aa13.24□□□□□ -0.29
PSEN1-208ENST00000553719 C9orf47Q6ZRZ4 202 aa13.24□□□□□ -0.29
PSEN1-208ENST00000553719 MRAPQ8TCY5 172 aa13.24□□□□□ -0.29
PSEN1-208ENST00000553719 TUBA4BQ9H853 241 aa13.24□□□□□ -0.29
PSEN1-208ENST00000553719 RGS13O14921 159 aa13.23□□□□□ -0.29
PSEN1-208ENST00000553719 OR10J6PQ8NGY7 276 aa13.23□□□□□ -0.29
PSEN1-208ENST00000553719 CMTM2Q8TAZ6 248 aa13.23□□□□□ -0.29
PSEN1-208ENST00000553719 FAM19A4Q96LR4 140 aa13.23□□□□□ -0.29
PSEN1-208ENST00000553719 VGLL1Q99990 258 aa13.23□□□□□ -0.29
PSEN1-208ENST00000553719 TXNDC17Q9BRA2 123 aa13.23□□□□□ -0.29
PSEN1-208ENST00000553719 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
PSEN1-208ENST00000553719 AGPAT4-IT1Q9H0P7 198 aa13.23□□□□□ -0.29
PSEN1-208ENST00000553719 KIR2DL5BA0A0G2JN68 375 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 KIR2DL5BA0A0G2JPC4 375 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 LOC102723971A0A1B0GUV8 181 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 SERTM2A0A1B0GWG4 89 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 C11orf94C9JXX5 98 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 IFNA1P01562 189 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 RPL35AP18077 110 aaKnown RBP13.22□□□□□ -0.29
PSEN1-208ENST00000553719 ERCC8Q13216 396 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 CST9LP1Q5W188 147 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 GOLT1AQ6ZVE7 132 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 KIR2DL5AQ8N109 375 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 KIR2DL5BQ8NHK3 375 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 ODF3Q96PU9 254 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 PPP1R14DQ9NXH3 145 aa13.22□□□□□ -0.29
PSEN1-208ENST00000553719 PEX7O00628 323 aa13.21□□□□□ -0.29
PSEN1-208ENST00000553719 IGLV2-11P01706 119 aa13.21□□□□□ -0.29
PSEN1-208ENST00000553719 CT45A10P0DMU9 189 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms