RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 MITD1Q8WV92 249 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 GNPNAT1Q96EK6 184 aaPredicted RBP7.99□□□□□ -1.13
NEK3-204ENST00000552973 SLC50A1Q9BRV3 221 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 RBM38Q9H0Z9 239 aaKnown RBP7.99□□□□□ -1.13
NEK3-204ENST00000552973 Q9H8V8 135 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 LSM5Q9Y4Y9 91 aaKnown RBP7.99□□□□□ -1.13
NEK3-204ENST00000552973 PKHD1P08F94 4074 aa7.99□□□□□ -1.13
NEK3-204ENST00000552973 TRAV12-3A0A0B4J271 114 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 FAM24AA6NFZ4 105 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 FAM25EA8MYX2 175 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 CST7O76096 145 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 CT45A10P0DMU9 189 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 HOXA5P20719 270 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 MIC13Q5XKP0 118 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 GGACTQ9BVM4 153 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 RNF24Q9Y225 148 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 ABCA13Q86UQ4 5058 aa7.98□□□□□ -1.13
NEK3-204ENST00000552973 RLN2P04090 185 aa7.97□□□□□ -1.13
NEK3-204ENST00000552973 IGLC2P0DOY2 106 aa7.97□□□□□ -1.13
NEK3-204ENST00000552973 CAMLGP49069 296 aa7.97□□□□□ -1.13
NEK3-204ENST00000552973 CAV2P51636 162 aa7.97□□□□□ -1.13
NEK3-204ENST00000552973 Q6ZRG5 221 aa7.97□□□□□ -1.13
NEK3-204ENST00000552973 NRARPQ7Z6K4 114 aa7.97□□□□□ -1.13
NEK3-204ENST00000552973 ZNF431Q8TF32 576 aaPredicted RBP7.97□□□□□ -1.13
NEK3-204ENST00000552973 SAT2Q96F10 170 aaPredicted RBP7.97□□□□□ -1.13
NEK3-204ENST00000552973 C20orf144Q9BQM9 153 aa7.97□□□□□ -1.13
NEK3-204ENST00000552973 DNAJC4Q9NNZ3 241 aa7.97□□□□□ -1.13
NEK3-204ENST00000552973 NACAE9PAV3 2078 aa7.97□□□□□ -1.13
NEK3-204ENST00000552973 C5orf51A6NDU8 294 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 SNURFLB1AK76 121 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 ZNF701M0R085 212 aaPredicted RBP7.96□□□□□ -1.14
NEK3-204ENST00000552973 IL7P13232 177 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 M6PRP20645 277 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 ZNF846Q147U1 533 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 ESRGQ1W209 222 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 LINC00612Q8N6U2 182 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 MAPKAPK5-AS1Q8N8E1 139 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 RXFP4Q8TDU9 374 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 KRTAP1-5Q9BYS1 174 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 C20orf85Q9H1P6 137 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 ZNF586Q9NXT0 402 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 PXMP4Q9Y6I8 212 aa7.96□□□□□ -1.14
NEK3-204ENST00000552973 TRAV6A0A075B6T7 132 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 M0R3E3 92 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 PLA2G10O15496 165 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 LEPP41159 167 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 ERCC8Q13216 396 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 RAB31Q13636 194 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 Q6ZTI0 123 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 SPATA12Q7Z6I5 190 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 SEC22CQ9BRL7 303 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 TMPRSS5Q9H3S3 457 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 LRP1BQ9NZR2 4599 aa7.95□□□□□ -1.14
NEK3-204ENST00000552973 UBE2L5PA0A1B0GUS4 154 aa7.94□□□□□ -1.14
NEK3-204ENST00000552973 NPIPB6E9PJ23 425 aa7.94□□□□□ -1.14
NEK3-204ENST00000552973 BAXQ07812 192 aa7.94□□□□□ -1.14
NEK3-204ENST00000552973 OR1L4Q8NGR5 311 aa7.94□□□□□ -1.14
NEK3-204ENST00000552973 GSN-AS1Q9NRJ2 163 aa7.94□□□□□ -1.14
NEK3-204ENST00000552973 UQCC1Q9NVA1 299 aa7.94□□□□□ -1.14
NEK3-204ENST00000552973 WDR83OSQ9Y284 106 aa7.94□□□□□ -1.14
NEK3-204ENST00000552973 LYRM1O43325 122 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 CDK2AP2O75956 126 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 TCRBP04435 133 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 S100A10P60903 97 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 CD300CQ08708 224 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 BTN1A1Q13410 526 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 GUK1Q16774 197 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 CNPY1Q3B7I2 92 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 PYGO2Q9BRQ0 406 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 C11orf1Q9H5F2 150 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 SLC39A9Q9NUM3 307 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 HSPG2P98160 4391 aa7.93□□□□□ -1.14
NEK3-204ENST00000552973 TRBV19A0A075B6N1 114 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 TRGV2A0A075B6R0 118 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 IGSF23A1L1A6 192 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 C7orf71A4D174 169 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 PYYP10082 97 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 PVALBP20472 110 aaPredicted RBP7.92□□□□□ -1.14
NEK3-204ENST00000552973 RNASE4P34096 147 aaKnown RBP7.92□□□□□ -1.14
NEK3-204ENST00000552973 RPL29P47914 159 aaKnown RBP7.92□□□□□ -1.14
NEK3-204ENST00000552973 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 TTC32Q5I0X7 151 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 GCSAMLQ5JQS6 135 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 EXOC3-AS1Q8N2X6 119 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 C12orf45Q8N5I9 185 aaPredicted RBP7.92□□□□□ -1.14
NEK3-204ENST00000552973 TMEM252Q8N6L7 170 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 BLNKQ8WV28 456 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 ZNF503Q96F45 646 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 VSIG2Q96IQ7 327 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 C2orf50Q96LR7 162 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 ODF3Q96PU9 254 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 PFDN5Q99471 154 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 AGPAT4-IT1Q9H0P7 198 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 Q9H3A6 140 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 MRPS16Q9Y3D3 137 aaKnown RBP7.92□□□□□ -1.14
NEK3-204ENST00000552973 TIMM9Q9Y5J7 89 aa7.92□□□□□ -1.14
NEK3-204ENST00000552973 A0A096LPF7 62 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 TRGV1A0A0A0MS02 117 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 NDUFB4O95168 129 aa7.91□□□□□ -1.14
NEK3-204ENST00000552973 IGHV3-53P01767 116 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms