RNA–Protein interactions for RNA: ENST00000552045.1

LIMA1-210, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-210ENST00000552045 CFAP46Q8IYW2 2715 aa2.65□□□□□ -1.98
LIMA1-210ENST00000552045 KALRNO60229 2985 aa2.65□□□□□ -1.98
LIMA1-210ENST00000552045 LOC400499M0QZD8 3231 aa2.65□□□□□ -1.98
LIMA1-210ENST00000552045 DNHD1Q96M86 4753 aa2.65□□□□□ -1.98
LIMA1-210ENST00000552045 OR4E1P0C645 316 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 PHBP35232 272 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 RRN3P1Q2M238 152 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 OR4E2Q8NGC2 313 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 SH3BGRL3Q9H299 93 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 CST9LQ9H4G1 147 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 ATPIF1Q9UII2 106 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 LHFPL6Q9Y693 200 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 MYH7BA7E2Y1 1941 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 CHD9Q3L8U1 2897 aa2.65□□□□□ -1.99
LIMA1-210ENST00000552045 UBR5O95071 2799 aaPredicted RBP2.65□□□□□ -1.99
LIMA1-210ENST00000552045 CCDC88CQ9P219 2028 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 DMDP11532 3685 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 H7C1C5 153 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 AIPO00170 330 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 CTSDP07339 412 aaPredicted RBP2.64□□□□□ -1.99
LIMA1-210ENST00000552045 B2MP61769 119 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 LCN6P62502 163 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 Q6ZQT0 140 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 HIST1H2BLQ99880 126 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 EPDR1Q9UM22 224 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 SSR3Q9UNL2 185 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 CREBBPQ92793 2442 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 CHD7Q9P2D1 2997 aa2.64□□□□□ -1.99
LIMA1-210ENST00000552045 LOC730098B7Z3J9 87 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 MFSD11O43934 449 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 TCTAP57738 103 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 C3orf33Q6P1S2 294 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 EXOC3-AS1Q8N2X6 119 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 C10orf126Q8N4M7 172 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 SERPINI1Q99574 410 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 YIPF3Q9GZM5 350 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 BIN3Q9NQY0 253 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 ACER3Q9NUN7 267 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 MYH2Q9UKX2 1941 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 TRIOO75962 3097 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 TENM4Q6N022 2769 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 CEP295Q9C0D2 2601 aa2.63□□□□□ -1.99
LIMA1-210ENST00000552045 NBEAQ8NFP9 2946 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 MYH3P11055 1940 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 DENND4CQ5VZ89 1909 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 EDC4Q6P2E9 1401 aaKnown RBP2.62□□□□□ -1.99
LIMA1-210ENST00000552045 MEIKINA0A087WXM9 373 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 TMEM212A6NML5 194 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 PGRMC1O00264 195 aaKnown RBP2.62□□□□□ -1.99
LIMA1-210ENST00000552045 EIF5AP63241 154 aaKnown RBP2.62□□□□□ -1.99
LIMA1-210ENST00000552045 ZNF826PQ6ZT77 177 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 SLAMF6Q96DU3 332 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 PCBD2Q9H0N5 130 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 MIXL1Q9H2W2 232 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 NAV3Q8IVL0 2385 aa2.62□□□□□ -1.99
LIMA1-210ENST00000552045 DUOX1Q9NRD9 1551 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 ITPR1Q14643 2758 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 IGF2RP11717 2491 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 IGKV1D-42A0A075B6H8 117 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 BANF1O75531 89 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 FKBP2P26885 142 aaKnown RBP2.61□□□□□ -1.99
LIMA1-210ENST00000552045 SERPINB1P30740 379 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 RNASE4P34096 147 aaKnown RBP2.61□□□□□ -1.99
LIMA1-210ENST00000552045 SRP14P37108 136 aaKnown RBP2.61□□□□□ -1.99
LIMA1-210ENST00000552045 TSNQ15631 228 aaKnown RBP2.61□□□□□ -1.99
LIMA1-210ENST00000552045 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 PCOTHQ58A44 107 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 Q6ZRN7 208 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-210ENST00000552045 GRINAQ7Z429 371 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 OR4D11Q8NGI4 311 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 STAG3L4Q8TBR4 150 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 MBD3L1Q8WWY6 194 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 AQP3Q92482 292 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 ZHX1-C8orf76Q96EF9 292 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 LYSMD1Q96S90 227 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 PBDC1Q9BVG4 233 aa2.61□□□□□ -1.99
LIMA1-210ENST00000552045 DSPP15924 2871 aaKnown RBP2.61□□□□□ -1.99
LIMA1-210ENST00000552045 OBSL1O75147 1896 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 PLXNA1Q9UIW2 1896 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 HIVEP2P31629 2446 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 FRYLO94915 3013 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 PPP5D1E7EU14 171 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 TAX1BP3O14907 124 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 IFI30P13284 250 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 GPX2P18283 190 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 PSMD8P48556 350 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 ELOBQ15370 118 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 STX19Q8N4C7 294 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 OR13D1Q8NGV5 346 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 POLQO75417 2590 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 ABCA2Q9BZC7 2435 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 RFX7Q2KHR2 1363 aa2.6□□□□□ -1.99
LIMA1-210ENST00000552045 IBTKQ9P2D0 1353 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-210ENST00000552045 IGSF10Q6WRI0 2623 aa2.59□□□□□ -1.99
LIMA1-210ENST00000552045 C7orf71A4D174 169 aa2.59□□□□□ -1.99
LIMA1-210ENST00000552045 CST8O60676 142 aa2.59□□□□□ -1.99
LIMA1-210ENST00000552045 UBBP0CG47 229 aa2.59□□□□□ -1.99
LIMA1-210ENST00000552045 AKR1C3P42330 323 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms