RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 LCN12Q6JVE5 192 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 RASL11AQ6T310 242 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 TCF24Q7RTU0 167 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 TEX29Q8N6K0 151 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 A0A087X0K7 114 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 A0A1W2PS18 150 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 C19orf71A6NCJ1 209 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 SMAD7O15105 426 aaKnown RBP11.96□□□□□ -0.49
SCN8A-206ENST00000550891 TRBV12-3P01733 135 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 FAM209BQ5JX69 171 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 Q6YL49 198 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 ZC2HC1AQ96GY0 325 aa11.96□□□□□ -0.49
SCN8A-206ENST00000550891 IGLV1-40P01703 118 aa11.96□□□□□ -0.5
SCN8A-206ENST00000550891 APOHP02749 345 aaPredicted RBP11.96□□□□□ -0.5
SCN8A-206ENST00000550891 COA6Q5JTJ3 125 aaKnown RBP11.96□□□□□ -0.5
SCN8A-206ENST00000550891 C9orf139Q6ZV77 190 aa11.96□□□□□ -0.5
SCN8A-206ENST00000550891 BAGE3Q86Y29 109 aa11.96□□□□□ -0.5
SCN8A-206ENST00000550891 PACRGQ96M98 296 aaPredicted RBP11.96□□□□□ -0.5
SCN8A-206ENST00000550891 ASCL2Q99929 193 aa11.96□□□□□ -0.5
SCN8A-206ENST00000550891 GRIFINA4D1Z8 144 aa11.95□□□□□ -0.5
SCN8A-206ENST00000550891 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
SCN8A-206ENST00000550891 RPL11P62913 178 aaKnown RBP11.95□□□□□ -0.5
SCN8A-206ENST00000550891 TMEM18Q96B42 140 aa11.95□□□□□ -0.5
SCN8A-206ENST00000550891 CELSR1Q9NYQ6 3014 aa11.95□□□□□ -0.5
SCN8A-206ENST00000550891 HOXA3O43365 443 aaPredicted RBP11.95□□□□□ -0.5
SCN8A-206ENST00000550891 APCSP02743 223 aa11.95□□□□□ -0.5
SCN8A-206ENST00000550891 TMEM136Q6ZRR5 245 aa11.95□□□□□ -0.5
SCN8A-206ENST00000550891 ATP5L2Q7Z4Y8 100 aa11.95□□□□□ -0.5
SCN8A-206ENST00000550891 PGLYRP4Q96LB8 373 aa11.95□□□□□ -0.5
SCN8A-206ENST00000550891 ZNF580Q9UK33 172 aa11.95□□□□□ -0.5
SCN8A-206ENST00000550891 HLA-DMBP28068 263 aa11.94□□□□□ -0.5
SCN8A-206ENST00000550891 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
SCN8A-206ENST00000550891 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
SCN8A-206ENST00000550891 C16orf92Q96LL3 132 aa11.94□□□□□ -0.5
SCN8A-206ENST00000550891 GFRA4Q9GZZ7 299 aa11.94□□□□□ -0.5
SCN8A-206ENST00000550891 NIT2Q9NQR4 276 aa11.94□□□□□ -0.5
SCN8A-206ENST00000550891 IFITM10A6NMD0 228 aa11.94□□□□□ -0.5
SCN8A-206ENST00000550891 ZNF705FA8MVS1 300 aaPredicted RBP11.94□□□□□ -0.5
SCN8A-206ENST00000550891 FSHBP01225 129 aa11.94□□□□□ -0.5
SCN8A-206ENST00000550891 HIST1H2BLQ99880 126 aa11.94□□□□□ -0.5
SCN8A-206ENST00000550891 FAM106AQ4KMX7 169 aa11.94□□□□□ -0.5
SCN8A-206ENST00000550891 PEF1Q9UBV8 284 aaKnown RBP11.94□□□□□ -0.5
SCN8A-206ENST00000550891 IGHG4P01861 327 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 KIAA1644Q3SXP7 199 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 BORCS7Q96B45 105 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 PSMG3-AS1Q96PY0 264 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 CCDC168Q8NDH2 2452 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 PRRC2AP48634 2157 aaKnown RBP11.93□□□□□ -0.5
SCN8A-206ENST00000550891 FAM231BA6NCW3 169 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 HBBP68871 147 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 RNF182Q8N6D2 247 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 C8orf49Q96NF6 230 aa11.93□□□□□ -0.5
SCN8A-206ENST00000550891 FAM162BQ5T6X4 162 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 C8orf86Q6ZUL3 223 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 Q8TAT8 98 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 TPPP3Q9BW30 176 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 CLEC5AQ9NY25 188 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 U3KQE9 123 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 C16orf54Q6UWD8 224 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 WIPF2Q8TF74 440 aaPredicted RBP11.92□□□□□ -0.5
SCN8A-206ENST00000550891 PRR25Q96S07 402 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 NPIPB6E9PJ23 425 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 BMI1P35226 326 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 CFHR3Q02985 330 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 VGLL1Q99990 258 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 VPS13CQ709C8 3753 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 CR1P17927 2039 aa11.92□□□□□ -0.5
SCN8A-206ENST00000550891 GZMBP10144 247 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 TMEM89A2RUT3 159 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 PSMB8P28062 276 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 TMEM78Q5T7P6 136 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 DUX5Q96PT3 197 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 DAZ1Q9NQZ3 744 aaKnown RBP11.91□□□□□ -0.5
SCN8A-206ENST00000550891 CSMD2Q7Z408 3487 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 TMEM189A5PLL7 270 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 AMBPP02760 352 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 SRIP30626 198 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 KRTAP1-3Q8IUG1 177 aa11.91□□□□□ -0.5
SCN8A-206ENST00000550891 GTSF1Q8WW33 167 aa11.9□□□□□ -0.5
SCN8A-206ENST00000550891 GLMPQ8WWB7 406 aa11.9□□□□□ -0.5
SCN8A-206ENST00000550891 Q6AWC8 147 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 TMEM256Q8N2U0 113 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 TMSB15BA0A087X1C1 80 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 RBAKDNA6NC62 111 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 SH2D1AO60880 128 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 IL17RELQ6ZVW7 336 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 Q71RC1 249 aaPredicted RBP11.89□□□□□ -0.51
SCN8A-206ENST00000550891 ZNF738Q8NE65 137 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 MRPL53Q96EL3 112 aaKnown RBP11.89□□□□□ -0.51
SCN8A-206ENST00000550891 IGKV3-7A0A075B6H7 116 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 A0A1B0GUS0 222 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 ERCC8Q13216 396 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 RIGQ13278 110 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 SIGLECL1Q8N7X8 197 aa11.89□□□□□ -0.51
SCN8A-206ENST00000550891 SSBP4Q9BWG4 385 aaPredicted RBP11.89□□□□□ -0.51
SCN8A-206ENST00000550891 RHPN1-AS1Q9BWJ2 59 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms