RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 HLA-DRB4X5D2U9 266 aa1.16□□□□□ -2.22
CNOT2-215ENST00000548863 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
CNOT2-215ENST00000548863 LCTP09848 1927 aa1.16□□□□□ -2.22
CNOT2-215ENST00000548863 ABCC10Q5T3U5 1492 aa1.16□□□□□ -2.22
CNOT2-215ENST00000548863 MED1Q15648 1581 aaPredicted RBP1.16□□□□□ -2.22
CNOT2-215ENST00000548863 TTC37Q6PGP7 1564 aa1.16□□□□□ -2.22
CNOT2-215ENST00000548863 MPDZO75970 2070 aa1.16□□□□□ -2.22
CNOT2-215ENST00000548863 DSCAML1Q8TD84 2053 aa1.16□□□□□ -2.22
CNOT2-215ENST00000548863 ADGRB3O60242 1522 aa1.15□□□□□ -2.22
CNOT2-215ENST00000548863 TOPBP1Q92547 1522 aa1.15□□□□□ -2.22
CNOT2-215ENST00000548863 KMT2BQ9UMN6 2715 aaPredicted RBP1.15□□□□□ -2.23
CNOT2-215ENST00000548863 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.15□□□□□ -2.23
CNOT2-215ENST00000548863 A0A0J9YW62 118 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 MDFIC2A0A1B0GVS7 189 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 A0A1W2PQD3 144 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 H3BT86 120 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 CREBL2O60519 120 aaPredicted RBP1.15□□□□□ -2.23
CNOT2-215ENST00000548863 TCL1BO95988 128 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 HBDP02042 147 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 CD14P08571 375 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 TRGC1P0CF51 173 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 ARL14EPLP0DKL9 152 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 XCL1P47992 114 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 S100A10P60903 97 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 TMEM258P61165 79 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 LSM3P62310 102 aaKnown RBP1.15□□□□□ -2.23
CNOT2-215ENST00000548863 SNRPD3P62318 126 aaKnown RBP1.15□□□□□ -2.23
CNOT2-215ENST00000548863 DYNLT1P63172 113 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 SUPT4H1P63272 117 aaKnown RBP1.15□□□□□ -2.23
CNOT2-215ENST00000548863 BTG2P78543 158 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 CATR1Q13166 79 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 KHDC3LQ587J8 217 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 CLLU1Q5K131 121 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 DPPA3Q6W0C5 159 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 TMEM91Q6ZNR0 172 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 C2orf91Q6ZV80 131 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 AAED1Q7RTV5 226 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 TEN1Q86WV5 123 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 ATOH7Q8N100 152 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 C4orf33Q8N1A6 199 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 PFN4Q8NHR9 129 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 DIRC1Q969H9 104 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 DPH3Q96FX2 82 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 IMMP2LQ96T52 175 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 SPANXDQ9BXN6 97 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 SMDT1Q9H4I9 107 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 Q9H521 79 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 C16orf95Q9H693 158 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 MPC1Q9Y5U8 109 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 IER3IP1Q9Y5U9 82 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 PZPP20742 1482 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 MYOM2P54296 1465 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 ADAMTS7Q9UKP4 1686 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 STRCP1A6NGW2 1772 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 DOCK4Q8N1I0 1966 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 PLXND1Q9Y4D7 1925 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 ATAD5Q96QE3 1844 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 DLC1Q96QB1 1528 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 RGS12O14924 1447 aa1.15□□□□□ -2.23
CNOT2-215ENST00000548863 KDM5CP41229 1560 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 A2ML1A8K2U0 1454 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 TRBV20-1A0A075B6N2 111 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 TRAV12-2A0A075B6T6 113 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 IGHV3-15A0A0B4J1V0 119 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 A0A0D9SG52 128 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 PNMA8CA0A1B0GUJ8 204 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 SDCBPO00560 298 aaPredicted RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 KLF7O75840 302 aaPredicted RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 MPC2O95563 127 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 TNFP01375 233 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 CD2P06729 351 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 MSMBP08118 114 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 SPINK8P0C7L1 97 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 ZNF705BP0CI00 300 aaPredicted RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 TPT1P13693 172 aaKnown RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 NFYAP23511 347 aaPredicted RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 CD24P25063 80 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 RPL28P46779 137 aaKnown RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 MRPS36P82909 103 aaKnown RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 ZNF117Q03924 483 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 KLRD1Q13241 179 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 CDK5R1Q15078 307 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 FAM229BQ4G0N7 80 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 LINC01545Q5VT33 79 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 MRPL54Q6P161 138 aaKnown RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 PATE2Q6UY27 113 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 C9orf62Q8N4C0 152 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 FAM216BQ8N7L0 139 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 C3orf56Q8N813 242 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 C5orf17Q8NAS9 161 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 COPS9Q8WXC6 57 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 AQP3Q92482 292 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 FGF13Q92913 245 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 SAR1AQ9NR31 198 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 RPRMQ9NS64 109 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 TAS2R8Q9NYW2 309 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 LSM2Q9Y333 95 aaKnown RBP1.14□□□□□ -2.23
CNOT2-215ENST00000548863 DNAJC15Q9Y5T4 150 aa1.14□□□□□ -2.23
CNOT2-215ENST00000548863 V9GYS6 101 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms