RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 C16orf54Q6UWD8 224 aa10.23□□□□□ -0.77
PTPRB-205ENST00000547715 HIST3H2BBQ8N257 126 aa10.23□□□□□ -0.77
PTPRB-205ENST00000547715 ZNRF2Q8NHG8 242 aa10.23□□□□□ -0.77
PTPRB-205ENST00000547715 GLMPQ8WWB7 406 aa10.23□□□□□ -0.77
PTPRB-205ENST00000547715 MRGPRFQ96AM1 343 aa10.23□□□□□ -0.77
PTPRB-205ENST00000547715 CTDSP1Q9GZU7 261 aa10.23□□□□□ -0.77
PTPRB-205ENST00000547715 YTHDF2Q9Y5A9 579 aaKnown RBP10.23□□□□□ -0.77
PTPRB-205ENST00000547715 HLA-DRB4X5D2U9 266 aa10.23□□□□□ -0.77
PTPRB-205ENST00000547715 SRRM2Q9UQ35 2752 aaKnown RBP10.23□□□□□ -0.77
PTPRB-205ENST00000547715 E5RGE8 158 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 CORTO00230 105 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 IGKV1-39P01597 117 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 PMP2P02689 132 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 IGKV1D-39P04432 117 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 RPL12P30050 165 aaKnown RBP10.22□□□□□ -0.77
PTPRB-205ENST00000547715 CAMLGP49069 296 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 SUB1P53999 127 aaKnown RBP eCLIP10.22□□□□□ -0.77
PTPRB-205ENST00000547715 NDUFA6P56556 154 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 MLANAQ16655 118 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 IZUMO4Q1ZYL8 232 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 TIGITQ495A1 244 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 GDF5OSQ5U4N7 250 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 SLC35G3Q8N808 338 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 OR10D4PQ8NGN7 298 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 OR4X1Q8NH49 305 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 EIF5A2Q9GZV4 153 aaKnown RBP10.22□□□□□ -0.77
PTPRB-205ENST00000547715 FNDC4Q9H6D8 234 aaPredicted RBP10.22□□□□□ -0.77
PTPRB-205ENST00000547715 NRN1Q9NPD7 142 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 GPR132Q9UNW8 380 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 U3KQE9 123 aa10.22□□□□□ -0.77
PTPRB-205ENST00000547715 LOC102723971A0A1B0GUV8 181 aa10.21□□□□□ -0.77
PTPRB-205ENST00000547715 M0R143 59 aa10.21□□□□□ -0.77
PTPRB-205ENST00000547715 MBP02144 154 aa10.21□□□□□ -0.77
PTPRB-205ENST00000547715 S100GP29377 79 aa10.21□□□□□ -0.77
PTPRB-205ENST00000547715 DEFB1P60022 68 aa10.21□□□□□ -0.77
PTPRB-205ENST00000547715 USF2Q15853 346 aaPredicted RBP10.21□□□□□ -0.77
PTPRB-205ENST00000547715 COA6Q5JTJ3 125 aaKnown RBP10.21□□□□□ -0.77
PTPRB-205ENST00000547715 TBC1D26Q86UD7 250 aa10.21□□□□□ -0.77
PTPRB-205ENST00000547715 ACY3Q96HD9 319 aa10.21□□□□□ -0.77
PTPRB-205ENST00000547715 SEPSECSQ9HD40 501 aaKnown RBP10.21□□□□□ -0.77
PTPRB-205ENST00000547715 VAX2Q9UIW0 290 aa10.21□□□□□ -0.77
PTPRB-205ENST00000547715 TRAV30A0A087WSZ9 112 aa10.2□□□□□ -0.78
PTPRB-205ENST00000547715 M0QYG6 137 aa10.2□□□□□ -0.78
PTPRB-205ENST00000547715 INAFM2P0DMQ5 153 aa10.2□□□□□ -0.78
PTPRB-205ENST00000547715 RNASE2P10153 161 aaKnown RBP10.2□□□□□ -0.78
PTPRB-205ENST00000547715 ZNF674Q2M3X9 581 aa10.2□□□□□ -0.78
PTPRB-205ENST00000547715 SIGLEC15Q6ZMC9 328 aa10.2□□□□□ -0.78
PTPRB-205ENST00000547715 OR5H2Q8NGV7 314 aa10.2□□□□□ -0.78
PTPRB-205ENST00000547715 TVP23CQ96ET8 276 aa10.2□□□□□ -0.78
PTPRB-205ENST00000547715 TRBV24-1A0A075B6N3 115 aa10.19□□□□□ -0.78
PTPRB-205ENST00000547715 CCSO14618 274 aa10.19□□□□□ -0.78
PTPRB-205ENST00000547715 MBPP02686 304 aaPredicted RBP10.19□□□□□ -0.78
PTPRB-205ENST00000547715 NKX2-1P43699 371 aaPredicted RBP10.19□□□□□ -0.78
PTPRB-205ENST00000547715 KRTAP10-2P60368 255 aa10.19□□□□□ -0.78
PTPRB-205ENST00000547715 RANP62826 216 aaKnown RBP10.19□□□□□ -0.78
PTPRB-205ENST00000547715 ZNF266Q14584 549 aa10.19□□□□□ -0.78
PTPRB-205ENST00000547715 TMEM183AQ8IXX5 376 aa10.19□□□□□ -0.78
PTPRB-205ENST00000547715 ZNF709Q8N972 641 aa10.19□□□□□ -0.78
PTPRB-205ENST00000547715 OR4B1Q8NGF8 309 aa10.19□□□□□ -0.78
PTPRB-205ENST00000547715 Q8WTZ3 238 aa10.19□□□□□ -0.78
PTPRB-205ENST00000547715 PACRGQ96M98 296 aaPredicted RBP10.19□□□□□ -0.78
PTPRB-205ENST00000547715 C14orf166Q9Y224 244 aaKnown RBP10.19□□□□□ -0.78
PTPRB-205ENST00000547715 GOLT1BQ9Y3E0 138 aa10.19□□□□□ -0.78
PTPRB-205ENST00000547715 INS-IGF2F8WCM5 200 aa10.18□□□□□ -0.78
PTPRB-205ENST00000547715 NUDT3O95989 172 aa10.18□□□□□ -0.78
PTPRB-205ENST00000547715 AKR1C4P17516 323 aa10.18□□□□□ -0.78
PTPRB-205ENST00000547715 TAGLN2P37802 199 aaKnown RBP10.18□□□□□ -0.78
PTPRB-205ENST00000547715 RND2P52198 227 aa10.18□□□□□ -0.78
PTPRB-205ENST00000547715 CCL18P55774 89 aa10.18□□□□□ -0.78
PTPRB-205ENST00000547715 IQCJQ1A5X6 159 aa10.18□□□□□ -0.78
PTPRB-205ENST00000547715 RRN3P1Q2M238 152 aa10.18□□□□□ -0.78
PTPRB-205ENST00000547715 GGNBP1Q5YKI7 109 aa10.18□□□□□ -0.78
PTPRB-205ENST00000547715 RPL7L1Q6DKI1 246 aaKnown RBP10.18□□□□□ -0.78
PTPRB-205ENST00000547715 GNPNAT1Q96EK6 184 aaPredicted RBP10.18□□□□□ -0.78
PTPRB-205ENST00000547715 MYCBP2O75592 4640 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 H0YIZ8 118 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 BUB3O43684 328 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST1H2BKO60814 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 IL4P05112 153 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST1H2BJP06899 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST1H2BOP23527 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST1H2BBP33778 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST1H2BDP58876 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST1H2BCP62807 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 COTL1Q14019 142 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 GAMTQ14353 236 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST2H2BEQ16778 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 KHDC3LQ587J8 217 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.17□□□□□ -0.78
PTPRB-205ENST00000547715 C1orf158Q8N1D5 194 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST1H2BHQ93079 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST1H2BNQ99877 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 HIST1H2BMQ99879 126 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 ENY2Q9NPA8 101 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 OR5AC2Q9NZP5 309 aa10.17□□□□□ -0.78
PTPRB-205ENST00000547715 IGLC1P0CG04 106 aa10.16□□□□□ -0.78
PTPRB-205ENST00000547715 HRH1P35367 487 aa10.16□□□□□ -0.78
PTPRB-205ENST00000547715 SRPXP78539 464 aa10.16□□□□□ -0.78
PTPRB-205ENST00000547715 ELOBQ15370 118 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms