RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 FAM231BA6NCW3 169 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 IGHV3-11P01762 117 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 CT45A10P0DMU9 189 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 IGFL4Q6B9Z1 124 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 TCF24Q7RTU0 167 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 ATP5L2Q7Z4Y8 100 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 OR2D3Q8NGH3 330 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 USP9YO00507 2555 aaPredicted RBP12.8□□□□□ -0.36
CHFR-224ENST00000545046 IGKV2-40A0A087WW87 121 aaPredicted RBP12.8□□□□□ -0.36
CHFR-224ENST00000545046 IGHV3-49A0A0A0MS15 119 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 GRIFINA4D1Z8 144 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 IGKV2D-40P01614 121 aaPredicted RBP12.8□□□□□ -0.36
CHFR-224ENST00000545046 AMBPP02760 352 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 SAPCD1Q5SSQ6 148 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 LCN12Q6JVE5 192 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 OR4X2Q8NGF9 303 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 ASCL2Q99929 193 aa12.8□□□□□ -0.36
CHFR-224ENST00000545046 TRBV12-3P01733 135 aa12.79□□□□□ -0.36
CHFR-224ENST00000545046 APCSP02743 223 aa12.79□□□□□ -0.36
CHFR-224ENST00000545046 CFHR3Q02985 330 aa12.79□□□□□ -0.36
CHFR-224ENST00000545046 Q71RC1 249 aaPredicted RBP12.79□□□□□ -0.36
CHFR-224ENST00000545046 TMEM18Q96B42 140 aa12.79□□□□□ -0.36
CHFR-224ENST00000545046 J3QKU1 62 aa12.79□□□□□ -0.36
CHFR-224ENST00000545046 IGHG4P01861 327 aa12.79□□□□□ -0.36
CHFR-224ENST00000545046 HLA-DMBP28068 263 aa12.79□□□□□ -0.36
CHFR-224ENST00000545046 Q6YL49 198 aa12.79□□□□□ -0.36
CHFR-224ENST00000545046 RBPMS2Q6ZRY4 209 aaKnown RBP12.79□□□□□ -0.36
CHFR-224ENST00000545046 C8orf49Q96NF6 230 aa12.79□□□□□ -0.36
CHFR-224ENST00000545046 PTPN13Q12923 2485 aa12.78□□□□□ -0.36
CHFR-224ENST00000545046 PRRC2AP48634 2157 aaKnown RBP12.78□□□□□ -0.36
CHFR-224ENST00000545046 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
CHFR-224ENST00000545046 PLA2G2AP14555 144 aa12.78□□□□□ -0.36
CHFR-224ENST00000545046 PYY3Q5JQD4 70 aa12.78□□□□□ -0.36
CHFR-224ENST00000545046 C16orf54Q6UWD8 224 aa12.78□□□□□ -0.36
CHFR-224ENST00000545046 TMEM256Q8N2U0 113 aa12.78□□□□□ -0.36
CHFR-224ENST00000545046 GTSF1Q8WW33 167 aa12.78□□□□□ -0.36
CHFR-224ENST00000545046 PGLYRP4Q96LB8 373 aa12.78□□□□□ -0.36
CHFR-224ENST00000545046 VPREB3Q9UKI3 123 aa12.78□□□□□ -0.36
CHFR-224ENST00000545046 Q0VG73 95 aa12.77□□□□□ -0.36
CHFR-224ENST00000545046 KIAA1644Q3SXP7 199 aa12.77□□□□□ -0.36
CHFR-224ENST00000545046 FAM209BQ5JX69 171 aa12.77□□□□□ -0.36
CHFR-224ENST00000545046 CSMD2Q7Z408 3487 aa12.77□□□□□ -0.36
CHFR-224ENST00000545046 CAMPP49913 170 aa12.77□□□□□ -0.37
CHFR-224ENST00000545046 TMEM95Q3KNT9 176 aa12.77□□□□□ -0.37
CHFR-224ENST00000545046 LCNL1Q6ZST4 164 aa12.77□□□□□ -0.37
CHFR-224ENST00000545046 BAGE3Q86Y29 109 aa12.77□□□□□ -0.37
CHFR-224ENST00000545046 A0A1B0GUS0 222 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 CRIP1P50238 77 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 HBBP68871 147 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 KRTAP1-3Q8IUG1 177 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 PRR25Q96S07 402 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 A0A1B0GXF2 115 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 UNQ9165/PRO28630Q6UXU0 137 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 COX8CQ7Z4L0 72 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 VGLL1Q99990 258 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 NDFIP1Q9BT67 221 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 NPFFR1Q9GZQ6 430 aa12.76□□□□□ -0.37
CHFR-224ENST00000545046 A0A1W2PS18 150 aa12.75□□□□□ -0.37
CHFR-224ENST00000545046 TMEM89A2RUT3 159 aa12.75□□□□□ -0.37
CHFR-224ENST00000545046 RBAKDNA6NC62 111 aa12.75□□□□□ -0.37
CHFR-224ENST00000545046 GZMBP10144 247 aa12.75□□□□□ -0.37
CHFR-224ENST00000545046 OR10J3Q5JRS4 329 aa12.75□□□□□ -0.37
CHFR-224ENST00000545046 C8orf86Q6ZUL3 223 aa12.75□□□□□ -0.37
CHFR-224ENST00000545046 RNF182Q8N6D2 247 aa12.75□□□□□ -0.37
CHFR-224ENST00000545046 GLMPQ8WWB7 406 aa12.75□□□□□ -0.37
CHFR-224ENST00000545046 ABCA12Q86UK0 2595 aa12.75□□□□□ -0.37
CHFR-224ENST00000545046 KMT2BQ9UMN6 2715 aaPredicted RBP12.75□□□□□ -0.37
CHFR-224ENST00000545046 SRIP30626 198 aa12.74□□□□□ -0.37
CHFR-224ENST00000545046 SLAQ13239 276 aa12.74□□□□□ -0.37
CHFR-224ENST00000545046 FAM162BQ5T6X4 162 aa12.74□□□□□ -0.37
CHFR-224ENST00000545046 GDF5OSQ5U4N7 250 aa12.74□□□□□ -0.37
CHFR-224ENST00000545046 CLEC5AQ9NY25 188 aa12.74□□□□□ -0.37
CHFR-224ENST00000545046 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
CHFR-224ENST00000545046 NAV2Q8IVL1 2488 aa12.74□□□□□ -0.37
CHFR-224ENST00000545046 PSMB8P28062 276 aa12.74□□□□□ -0.37
CHFR-224ENST00000545046 FOXA3P55318 350 aaPredicted RBP12.74□□□□□ -0.37
CHFR-224ENST00000545046 S100A12P80511 92 aa12.74□□□□□ -0.37
CHFR-224ENST00000545046 MRPL53Q96EL3 112 aaKnown RBP12.74□□□□□ -0.37
CHFR-224ENST00000545046 TP53TG3Q9ULZ0 132 aa12.74□□□□□ -0.37
CHFR-224ENST00000545046 HOXA3O43365 443 aaPredicted RBP12.73□□□□□ -0.37
CHFR-224ENST00000545046 NUPR1O60356 82 aa12.73□□□□□ -0.37
CHFR-224ENST00000545046 Q8TAT8 98 aa12.73□□□□□ -0.37
CHFR-224ENST00000545046 TMEM189A5PLL7 270 aa12.73□□□□□ -0.37
CHFR-224ENST00000545046 SH2D1AO60880 128 aa12.73□□□□□ -0.37
CHFR-224ENST00000545046 SERF1AO75920 110 aa12.73□□□□□ -0.37
CHFR-224ENST00000545046 BMI1P35226 326 aa12.73□□□□□ -0.37
CHFR-224ENST00000545046 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
CHFR-224ENST00000545046 PSMG3-AS1Q96PY0 264 aa12.73□□□□□ -0.37
CHFR-224ENST00000545046 SSBP4Q9BWG4 385 aaPredicted RBP12.73□□□□□ -0.37
CHFR-224ENST00000545046 APCP25054 2843 aa12.73□□□□□ -0.37
CHFR-224ENST00000545046 TRAV8-2A0A0B4J237 113 aa12.72□□□□□ -0.37
CHFR-224ENST00000545046 A8MWP6 167 aa12.72□□□□□ -0.37
CHFR-224ENST00000545046 PRAC2D3DTV9 90 aa12.72□□□□□ -0.37
CHFR-224ENST00000545046 SMAD7O15105 426 aaKnown RBP12.72□□□□□ -0.37
CHFR-224ENST00000545046 ESDP10768 282 aa12.72□□□□□ -0.37
CHFR-224ENST00000545046 PAFAH1B2P68402 229 aa12.72□□□□□ -0.37
CHFR-224ENST00000545046 ERCC8Q13216 396 aa12.72□□□□□ -0.37
CHFR-224ENST00000545046 HIST2H2BCQ6DN03 193 aa12.72□□□□□ -0.37
CHFR-224ENST00000545046 PRDM13Q9H4Q3 707 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms