RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 POLR3KQ9Y2Y1 108 aaPredicted RBP8.41□□□□□ -1.06
PCDH9-204ENST00000544246 IGHV1OR15-1A0A075B7D0 117 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 NDUFS6O75380 124 aaKnown RBP8.41□□□□□ -1.06
PCDH9-204ENST00000544246 PRB1P04280 392 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 CFPP27918 469 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 SPINK13Q1W4C9 94 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 PRSS57Q6UWY2 283 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 FNDC10F2Z333 226 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 CFHR2P36980 270 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 SEC61GP60059 68 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 PYY3Q5JQD4 70 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 PLA2G5P39877 138 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 MP68P56378 58 aa8.41□□□□□ -1.06
PCDH9-204ENST00000544246 BRWD1Q9NSI6 2320 aa8.4□□□□□ -1.06
PCDH9-204ENST00000544246 IGLV3-32A0A0A0MS00 114 aa8.4□□□□□ -1.06
PCDH9-204ENST00000544246 CRYGSP22914 178 aa8.4□□□□□ -1.06
PCDH9-204ENST00000544246 GAGE12HA6NDE8 117 aa8.4□□□□□ -1.06
PCDH9-204ENST00000544246 FAM104BQ5XKR9 115 aa8.4□□□□□ -1.06
PCDH9-204ENST00000544246 FGFBP3Q8TAT2 258 aa8.4□□□□□ -1.06
PCDH9-204ENST00000544246 A8MWP6 167 aa8.4□□□□□ -1.06
PCDH9-204ENST00000544246 HLA-DMBP28068 263 aa8.4□□□□□ -1.06
PCDH9-204ENST00000544246 IGKV1-12A0A0C4DH73 117 aa8.4□□□□□ -1.07
PCDH9-204ENST00000544246 F6UB75 175 aa8.4□□□□□ -1.07
PCDH9-204ENST00000544246 IGKV1D-12P01611 117 aa8.4□□□□□ -1.07
PCDH9-204ENST00000544246 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.07
PCDH9-204ENST00000544246 KLHDC3Q9BQ90 382 aa8.4□□□□□ -1.07
PCDH9-204ENST00000544246 NDUFB1O75438 58 aa8.4□□□□□ -1.07
PCDH9-204ENST00000544246 NCOR1P1Q9H4R4 102 aa8.4□□□□□ -1.07
PCDH9-204ENST00000544246 EP300Q09472 2414 aaPredicted RBP8.4□□□□□ -1.07
PCDH9-204ENST00000544246 PINLYPA6NC86 204 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 K7EP13 123 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 A0A1W2PPM0 123 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 PRB2P02812 416 aaPredicted RBP8.39□□□□□ -1.07
PCDH9-204ENST00000544246 SPACA3Q8IXA5 215 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 NTN3O00634 580 aaPredicted RBP8.39□□□□□ -1.07
PCDH9-204ENST00000544246 ANGP03950 147 aaKnown RBP8.39□□□□□ -1.07
PCDH9-204ENST00000544246 RS1O15537 224 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 NDUFB8O95169 186 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 BVES-AS1Q5T3Y7 98 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 C8orf31Q8N9H6 132 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 FAM110DQ8TAY7 271 aaPredicted RBP8.39□□□□□ -1.07
PCDH9-204ENST00000544246 ETDBQ3ZM63 59 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 C20orf144Q9BQM9 153 aa8.39□□□□□ -1.07
PCDH9-204ENST00000544246 MYO16Q9Y6X6 1858 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 NINQ8N4C6 2090 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 MST1LQ2TV78 715 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 CFHR4Q92496 578 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 TRAV26-2A0A0B4J265 109 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 LHFPL1Q86WI0 220 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 PRSS33Q8NF86 280 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 CCDC88CQ9P219 2028 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 GNLYP22749 145 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 DKK4Q9UBT3 224 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 RIF1Q5UIP0 2472 aaKnown RBP8.38□□□□□ -1.07
PCDH9-204ENST00000544246 IGKV2D-24A0A075B6R9 120 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 C15orf62A8K5M9 175 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 IGLC2P0DOY2 106 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 IGLC3P0DOY3 106 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 MRPL51Q4U2R6 128 aaKnown RBP8.38□□□□□ -1.07
PCDH9-204ENST00000544246 IGF2BP2-AS1Q96M15 143 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 C14orf132Q9NPU4 83 aa8.38□□□□□ -1.07
PCDH9-204ENST00000544246 LINC00473A8K010 186 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 COX8AP10176 69 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 SAA4P35542 130 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 C18orf32Q8TCD1 76 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 GFI1Q99684 422 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 GREB1LQ9C091 1923 aaPredicted RBP8.37□□□□□ -1.07
PCDH9-204ENST00000544246 A0A087WV48 116 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 ETDCA0A1B0GVM5 59 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 BAALC-AS2P0C853 105 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 RPL18AQ02543 176 aaKnown RBP8.37□□□□□ -1.07
PCDH9-204ENST00000544246 LGALS9BQ3B8N2 356 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 LGALS9CQ6DKI2 356 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 CLPSL2Q6UWE3 100 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 SS18L2Q9UHA2 77 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 IGLV3-12A0A075B6K2 115 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 IGKV1OR2-108A0A075B7D4 117 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 A0A096LPF7 62 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 ACYP1P07311 99 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 ZMAT4Q9H898 229 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 CFHR1Q03591 330 aa8.37□□□□□ -1.07
PCDH9-204ENST00000544246 IGKV1-27A0A075B6S5 117 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 SPTBN2O15020 2390 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 IGKV1-39P01597 117 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 IGKV1D-39P04432 117 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 TRBV6-6A0A0A6YYG2 114 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 IGHV4-28A0A0C4DH34 117 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 A0A1B0GX51 115 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 J3QQQ9 107 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 RUSC1-AS1Q66K80 236 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 MBD3L4A6NDZ8 208 aaPredicted RBP8.36□□□□□ -1.07
PCDH9-204ENST00000544246 MBD3L3A6NE82 208 aaPredicted RBP8.36□□□□□ -1.07
PCDH9-204ENST00000544246 MBD3L5A6NJ08 208 aaPredicted RBP8.36□□□□□ -1.07
PCDH9-204ENST00000544246 J3QRE1 110 aa8.36□□□□□ -1.07
PCDH9-204ENST00000544246 SRSF2Q01130 221 aaKnown RBP8.36□□□□□ -1.07
PCDH9-204ENST00000544246 MBD3L2Q8NHZ7 208 aaPredicted RBP8.36□□□□□ -1.07
PCDH9-204ENST00000544246 NTN5Q8WTR8 489 aaPredicted RBP8.36□□□□□ -1.07
PCDH9-204ENST00000544246 LINC00479Q96M42 142 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms