RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 MSMO1Q15800 293 aa0.04□□□□□ -2.4
KNTC1-213ENST00000542727 LINC00299Q6ZSB3 139 aa0.04□□□□□ -2.4
KNTC1-213ENST00000542727 UHRF1BP1Q6BDS2 1440 aa0.04□□□□□ -2.4
KNTC1-213ENST00000542727 CAMSAP2Q08AD1 1489 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 PRORSD1PA6NEY8 169 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 LY6G6CO95867 125 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 IFNA6P05013 189 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 IDO1P14902 403 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 GNG5P63218 68 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 REEP5Q00765 189 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 MIR22HGQ0VDD5 57 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 VMA21Q3ZAQ7 101 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 CASC2Q6XLA1 102 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 C5orf17Q8NAS9 161 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 CEP19Q96LK0 163 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 PAIP2Q9BPZ3 127 aaKnown RBP0.03□□□□□ -2.4
KNTC1-213ENST00000542727 NABP2Q9BQ15 211 aa0.03□□□□□ -2.4
KNTC1-213ENST00000542727 CD109Q6YHK3 1445 aa0.03□□□□□ -2.41
KNTC1-213ENST00000542727 NISCHQ9Y2I1 1504 aa0.03□□□□□ -2.41
KNTC1-213ENST00000542727 ANKRD17O75179 2603 aaKnown RBP0.02□□□□□ -2.41
KNTC1-213ENST00000542727 MEGF8Q7Z7M0 2845 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 AIPO00170 330 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 HIST1H2BKO60814 126 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 SULT1C4O75897 302 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 ATG12O94817 140 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 IFNA14P01570 189 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 C1QBP02746 253 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 TRGC2P03986 189 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 HIST1H2BJP06899 126 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 DIAPH2-AS1Q14236 149 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 NEDD8Q15843 81 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 AKIRIN2Q53H80 203 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 FOXI2Q6ZQN5 318 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 ZCCHC23Q6ZST2 131 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 PRR15Q8IV56 129 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 GRPEL2Q8TAA5 225 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 MALSU1Q96EH3 234 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 AP1S3Q96PC3 154 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 GPX7Q96SL4 187 aaPredicted RBP0.02□□□□□ -2.41
KNTC1-213ENST00000542727 SS18L2Q9UHA2 77 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 PYCARDQ9ULZ3 195 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 ESPL1Q14674 2120 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 SSPOA2VEC9 5147 aa0.02□□□□□ -2.41
KNTC1-213ENST00000542727 RIIAD1A6NNX1 92 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 H7C1C5 153 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 ATP5HO75947 161 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 SPINK1P00995 79 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 APOA2P02652 100 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 MT-ND6P03923 174 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 CTXN2P0C2S0 81 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 OGNP20774 298 aaKnown RBP0.01□□□□□ -2.41
KNTC1-213ENST00000542727 CAV3P56539 151 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 LCN6P62502 163 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 TMED2Q15363 201 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 SPINK13Q1W4C9 94 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 SCGB2B2Q4G0G5 96 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 CROCCP2Q86T23 111 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 C10orf111Q8N326 155 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 FAM216BQ8N7L0 139 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 RMND5BQ96G75 393 aaPredicted RBP0.01□□□□□ -2.41
KNTC1-213ENST00000542727 PBDC1Q9BVG4 233 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 CST11Q9H112 138 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 LPAR5Q9H1C0 372 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 SSR3Q9UNL2 185 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 ASB4Q9Y574 426 aa0.01□□□□□ -2.41
KNTC1-213ENST00000542727 MAP2P11137 1827 aaKnown RBP0.01□□□□□ -2.41
KNTC1-213ENST00000542727 IGHV3-33P01772 117 aa0□□□□□ -2.41
KNTC1-213ENST00000542727 HSD11B1P28845 292 aa0□□□□□ -2.41
KNTC1-213ENST00000542727 PHBP35232 272 aa0□□□□□ -2.41
KNTC1-213ENST00000542727 PPP1R2P41236 205 aa0□□□□□ -2.41
KNTC1-213ENST00000542727 FADDQ13158 208 aa0□□□□□ -2.41
KNTC1-213ENST00000542727 SREK1IP1Q8N9Q2 155 aaPredicted RBP0□□□□□ -2.41
KNTC1-213ENST00000542727 NEK7Q8TDX7 302 aa0□□□□□ -2.41
KNTC1-213ENST00000542727 NAT8BQ9UHF3 227 aa0□□□□□ -2.41
KNTC1-213ENST00000542727 PRNDQ9UKY0 176 aa0□□□□□ -2.41
KNTC1-213ENST00000542727 TPRP12270 2363 aaKnown RBP-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 FER1L6Q2WGJ9 1857 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 TRAV5A0A0B4J249 113 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 PDE6GP18545 87 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 RPS3P23396 243 aaKnown RBP eCLIP-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 HBBP68871 147 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 AKR1C8PQ5T2L2 129 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 HACD4Q5VWC8 232 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 C10orf99Q6UWK7 81 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 OR4C12Q96R67 309 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 EFCAB11Q9BUY7 163 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 TPRKBQ9Y3C4 175 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 TANC1Q9C0D5 1861 aa-0.01□□□□□ -2.41
KNTC1-213ENST00000542727 RREB1Q92766 1687 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 A0A0J9YY99 117 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 C3orf85A0A1B0GTC6 90 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 A0A1W2PRS3 328 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 C5orf58C9J3I9 102 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 RPL35P42766 123 aaKnown RBP-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 MRPS25P82663 173 aaKnown RBP-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 POU6F1Q14863 301 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 C1orf140Q5VVS0 124 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 XAF1Q6GPH4 301 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 LYG2Q86SG7 212 aa-0.02□□□□□ -2.41
KNTC1-213ENST00000542727 OR13C6PQ8NH95 151 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms