RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 LYRM1O43325 122 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 OR1I1O60431 355 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 KLF7O75840 302 aaPredicted RBP2□□□□□ -2.09
LEMD3-204ENST00000542032 CD2P06729 351 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 ZNF22P17026 224 aaPredicted RBP2□□□□□ -2.09
LEMD3-204ENST00000542032 FUSP35637 526 aaKnown RBP eCLIP2□□□□□ -2.09
LEMD3-204ENST00000542032 FXYD2P54710 66 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 PCBD1P61457 104 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 CATR1Q13166 79 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 LINC00483Q53H64 154 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 LINC01545Q5VT33 79 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 LYZL1Q6UWQ5 148 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 AAED1Q7RTV5 226 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 LYPD6Q86Y78 171 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 C10orf111Q8N326 155 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 COPS9Q8WXC6 57 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 SNHG12Q9BXW3 62 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 SEC11CQ9BY50 192 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 AGPAT4-IT1Q9H0P7 198 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 SLC35B3Q9H1N7 401 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 NHP2Q9NX24 153 aaKnown RBP2□□□□□ -2.09
LEMD3-204ENST00000542032 TAS2R8Q9NYW2 309 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 MINOS1-NBL1R4GNA1 71 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 HSPE1-MOB4S4R3N1 261 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 RB1CC1Q8TDY2 1594 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 TUBGCP6Q96RT7 1819 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 PZPP20742 1482 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 ABCC10Q5T3U5 1492 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 TRPM3Q9HCF6 1732 aaPredicted RBP2□□□□□ -2.09
LEMD3-204ENST00000542032 MYOM3Q5VTT5 1437 aa2□□□□□ -2.09
LEMD3-204ENST00000542032 KIF13AQ9H1H9 1805 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 MYO10Q9HD67 2058 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 TRBV10-2A0A0K0K1G8 114 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 LRCOL1A6NCL2 159 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 GNRH2O43555 120 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 TNFP01375 233 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 PMP2P02689 132 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 CD3DP04234 171 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 COX6A1P12074 109 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 FABP4P15090 132 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 COL8A2P25067 703 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 CIRBPQ14011 172 aaKnown RBP1.99□□□□□ -2.09
LEMD3-204ENST00000542032 SS18Q15532 418 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 FAM27BQ5VT28 67 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 MRPL54Q6P161 138 aaKnown RBP1.99□□□□□ -2.09
LEMD3-204ENST00000542032 OR8B2Q96RD0 313 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 Q9H521 79 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 NAA60Q9H7X0 242 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 RPRMQ9NS64 109 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 MYOM2P54296 1465 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 LTBP4Q8N2S1 1624 aa1.99□□□□□ -2.09
LEMD3-204ENST00000542032 POLEQ07864 2286 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 TTC37Q6PGP7 1564 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 TRAV3A0A0B4J244 114 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 A0A1B0GU33 70 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 LOC107986453A0A1B0GWG9 222 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 ZNF736B4DX44 427 aaPredicted RBP1.98□□□□□ -2.09
LEMD3-204ENST00000542032 YPEL1O60688 119 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 ZNF737O75373 536 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 MPC2O95563 127 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 RBP4P02753 201 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 CTSDP07339 412 aaPredicted RBP1.98□□□□□ -2.09
LEMD3-204ENST00000542032 SPINK8P0C7L1 97 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 SAA1P0DJI8 122 aaPredicted RBP1.98□□□□□ -2.09
LEMD3-204ENST00000542032 PEBP1P30086 187 aaKnown RBP1.98□□□□□ -2.09
LEMD3-204ENST00000542032 ZNF90Q03938 601 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 ESRGQ1W209 222 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 Q56UQ5 140 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 Q6ZS52 159 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 Q6ZUT4 128 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 SLC35E3Q7Z769 313 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 OR5AS1Q8N127 324 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 C4orf33Q8N1A6 199 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 Q8NAQ8 132 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 C5orf17Q8NAS9 161 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 RAB37Q96AX2 223 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 RETNLBQ9BQ08 111 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 NABP2Q9BQ15 211 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 LINC00467Q9BRT7 94 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 METTL1Q9UBP6 276 aaKnown RBP1.98□□□□□ -2.09
LEMD3-204ENST00000542032 RPL26L1Q9UNX3 145 aaKnown RBP1.98□□□□□ -2.09
LEMD3-204ENST00000542032 TPRKBQ9Y3C4 175 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 LY96Q9Y6Y9 160 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 S4R3C0 116 aa1.98□□□□□ -2.09
LEMD3-204ENST00000542032 KIF26AQ9ULI4 1882 aaPredicted RBP1.98□□□□□ -2.09
LEMD3-204ENST00000542032 A2ML1A8K2U0 1454 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 COL1A1P02452 1464 aaPredicted RBP1.97□□□□□ -2.09
LEMD3-204ENST00000542032 RAPGEF2Q9Y4G8 1499 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 IGKV2-28A0A075B6P5 120 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 IGKV2D-24A0A075B6R9 120 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 IGHV3OR16-8A0A075B7F1 116 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 IGHV1-18A0A0C4DH31 117 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 GEMIN2O14893 280 aaKnown RBP1.97□□□□□ -2.09
LEMD3-204ENST00000542032 PITX3O75364 302 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 CPSF4O95639 269 aaKnown RBP1.97□□□□□ -2.09
LEMD3-204ENST00000542032 IGKV2D-28P01615 120 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 SHBGP04278 402 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 IFITM1P13164 125 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 CCL4P13236 92 aa1.97□□□□□ -2.09
LEMD3-204ENST00000542032 ZNF14P17017 642 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms