RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PKD1L1Q8TDX9 2849 aa4.04□□□□□ -1.76
CPSF7-220ENST00000541963 NBEAL1Q6ZS30 2694 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 M0R036 132 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 CORTO00230 105 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 SCGB2A1O75556 95 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 ADAP1O75689 374 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 CDS2O95674 445 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 TRBV12-3P01733 135 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 IGHV3-23P01764 117 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 HBE1P02100 147 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 UCP1P25874 307 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 TAGLN2P37802 199 aaKnown RBP4.03□□□□□ -1.76
CPSF7-220ENST00000541963 SULT1A1P50225 295 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 SRPXP78539 464 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 PRCDQ00LT1 54 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 WT1-ASQ06250 92 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 TMEM187Q14656 261 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 CLINT1Q14677 625 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 JOSD1Q15040 202 aaPredicted RBP4.03□□□□□ -1.76
CPSF7-220ENST00000541963 USF2Q15853 346 aaPredicted RBP4.03□□□□□ -1.76
CPSF7-220ENST00000541963 ANKRD55Q3KP44 614 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 SP6Q3SY56 376 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 Q56UQ5 140 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 TMEM128Q5BJH2 165 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 PYY3Q5JQD4 70 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 ZFP82Q8N141 532 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 SLC35G3Q8N808 338 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 OR51S1Q8NGJ8 323 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 ZNF502Q8TBZ5 544 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 ACY3Q96HD9 319 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 TP53RKQ96S44 253 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 TXN2Q99757 166 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 RTBDNQ9BSG5 229 aaPredicted RBP4.03□□□□□ -1.76
CPSF7-220ENST00000541963 TMEM222Q9H0R3 208 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 NAA60Q9H7X0 242 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.03□□□□□ -1.76
CPSF7-220ENST00000541963 C21orf62Q9NYP8 219 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 OR5AC2Q9NZP5 309 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 UFC1Q9Y3C8 167 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 TNCP24821 2201 aa4.03□□□□□ -1.76
CPSF7-220ENST00000541963 IGLV7-46A0A075B6I9 117 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 A0A1B0GV90 55 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 C5orf51A6NDU8 294 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 CRYM-AS1A6NIL9 109 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 C2orf70A6NJV1 201 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 A8MWP6 167 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 INS-IGF2F8WCM5 200 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 MED6O75586 246 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 IGKV1-39P01597 117 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 IGKV1D-39P04432 117 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 CFC1BP0CG36 223 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 CFC1P0CG37 223 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 AKR1C4P17516 323 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 CBLN1P23435 193 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 TMEM241Q24JQ0 296 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 COA6Q5JTJ3 125 aaKnown RBP4.02□□□□□ -1.77
CPSF7-220ENST00000541963 SOHLH1Q5JUK2 328 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 FAAP20Q6NZ36 180 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 C19orf35Q6ZS72 473 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 Q6ZVQ6 151 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 SELENOHQ8IZQ5 122 aaKnown RBP4.02□□□□□ -1.77
CPSF7-220ENST00000541963 LGI3Q8N145 548 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 OR2D3Q8NGH3 330 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 OR52E5Q8NH55 327 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 IL22RA2Q969J5 263 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 C2orf50Q96LR7 162 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 MRPL27Q9P0M9 148 aaKnown RBP4.02□□□□□ -1.77
CPSF7-220ENST00000541963 CACNG5Q9UF02 275 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 VAX2Q9UIW0 290 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 GOLT1BQ9Y3E0 138 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 S4R3C0 116 aa4.02□□□□□ -1.77
CPSF7-220ENST00000541963 VWFP04275 2813 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 TRBV24-1A0A075B6N3 115 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 TRAV25A0A0B4J276 109 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 DUXBA0A1W2PPF3 345 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 OR2T8A6NH00 312 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 CEBPZOSA8MTT3 80 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 K7EMT4 169 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 K7EPK0 472 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 NDUFA4O00483 81 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 CCSO14618 274 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 GNG7O60262 68 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 MT-CO2P00403 227 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 IFNA21P01568 189 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 IGKV1-5P01602 117 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 FCGR2BP31994 310 aaPredicted RBP4.01□□□□□ -1.77
CPSF7-220ENST00000541963 BMI1P35226 326 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 RPS10P46783 165 aaKnown RBP4.01□□□□□ -1.77
CPSF7-220ENST00000541963 CMC4P56277 68 aaPredicted RBP4.01□□□□□ -1.77
CPSF7-220ENST00000541963 RPS20P60866 119 aaKnown RBP4.01□□□□□ -1.77
CPSF7-220ENST00000541963 TNFRSF9Q07011 255 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 ZNF266Q14584 549 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 GUK1Q16774 197 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 DEFB114Q30KQ6 69 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 ACOT6Q3I5F7 207 aaPredicted RBP4.01□□□□□ -1.77
CPSF7-220ENST00000541963 MAJINQ3KP22 176 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 SMIM15Q7Z3B0 74 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 TMEM183AQ8IXX5 376 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 HIST3H2BBQ8N257 126 aa4.01□□□□□ -1.77
CPSF7-220ENST00000541963 PINX1Q96BK5 328 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms