RNA–Protein interactions for RNA: ENST00000541694.5

LINC01089-208, Transcript of long intergenic non-protein coding RNA 1089, human

TSL 2

Gene LINC01089, Length 875 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01089-208	ENST00000541694	NMB	P08949	121 aa		11.15	□□□□□ -0.62
LINC01089-208	ENST00000541694	DEFB1	P60022	68 aa		11.15	□□□□□ -0.62
LINC01089-208	ENST00000541694	ZNF124	Q15973	351 aa		11.15	□□□□□ -0.62
LINC01089-208	ENST00000541694	CST9LP1	Q5W188	147 aa		11.15	□□□□□ -0.62
LINC01089-208	ENST00000541694		Q8N1Y9	231 aa		11.15	□□□□□ -0.62
LINC01089-208	ENST00000541694	CMTM2	Q8TAZ6	248 aa		11.15	□□□□□ -0.62
LINC01089-208	ENST00000541694	RPUSD4	Q96CM3	377 aa	Known RBP	11.15	□□□□□ -0.62
LINC01089-208	ENST00000541694	MANBAL	Q9NQG1	85 aa		11.15	□□□□□ -0.62
LINC01089-208	ENST00000541694	AGRN	O00468	2067 aa		11.15	□□□□□ -0.63
LINC01089-208	ENST00000541694	KNCN	A6PVL3	124 aa		11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	GGTLC3	B5MD39	225 aa		11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	SLC25A5	P05141	298 aa	Known RBP	11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	PRB4	P10163	310 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	CSN1S1	P47710	185 aa		11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	SUMO1	P63165	101 aa	Known RBP	11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	ACTL10	Q5JWF8	245 aa		11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	EBLN2	Q6P2I7	272 aa		11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	DEFB125	Q8N687	156 aa		11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	LYPD6B	Q8NI32	183 aa		11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	RPH3AL	Q9UNE2	315 aa		11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694	ARL2-SNX15	V9GYD0	113 aa		11.14	□□□□□ -0.63
LINC01089-208	ENST00000541694		F6UB75	175 aa		11.13	□□□□□ -0.63
LINC01089-208	ENST00000541694	HAGH	Q16775	308 aa		11.13	□□□□□ -0.63
LINC01089-208	ENST00000541694	FOXI2	Q6ZQN5	318 aa		11.13	□□□□□ -0.63
LINC01089-208	ENST00000541694	C5orf17	Q8NAS9	161 aa		11.13	□□□□□ -0.63
LINC01089-208	ENST00000541694	RXFP4	Q8TDU9	374 aa		11.13	□□□□□ -0.63
LINC01089-208	ENST00000541694	NKX6-2	Q9C056	277 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC01089-208	ENST00000541694	SRD5A3	Q9H8P0	318 aa		11.13	□□□□□ -0.63
LINC01089-208	ENST00000541694	ATP5G3	P48201	142 aa		11.12	□□□□□ -0.63
LINC01089-208	ENST00000541694	SAV1	Q9H4B6	383 aa	Predicted RBP	11.12	□□□□□ -0.63
LINC01089-208	ENST00000541694	TUBA4B	Q9H853	241 aa		11.12	□□□□□ -0.63
LINC01089-208	ENST00000541694		A0A0J9YX75	114 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	PRAC2	D3DTV9	90 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	ZNF705D	P0CH99	300 aa	Predicted RBP	11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	ZNF705B	P0CI00	300 aa	Predicted RBP	11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	BCL2	P10415	239 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	GNG5	P63218	68 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	HIST1H1A	Q02539	215 aa	Predicted RBP	11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	PMS2P11	Q13670	270 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	GDF5OS	Q5U4N7	250 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	STH	Q8IWL8	128 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	OR8A1	Q8NGG7	326 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	OR10J6P	Q8NGY7	276 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	CITED4	Q96RK1	184 aa		11.11	□□□□□ -0.63
LINC01089-208	ENST00000541694	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	DIRC3	C9JPN6	131 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	C11orf94	C9JXX5	98 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	RGS13	O14921	159 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	DUSP14	O95147	198 aa	Known RBP	11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	IGKV2D-40	P01614	121 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	IGHV4-30-4	P0DP06	118 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	HLA-DRB4	P13762	266 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	TAGLN2	P37802	199 aa	Known RBP	11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	CLLU1	Q5K131	121 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	OR4B1	Q8NGF8	309 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	VAX2	Q9UIW0	290 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	EPDR1	Q9UM22	224 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	HLA-DRB4	X5D2U9	266 aa		11.1	□□□□□ -0.63
LINC01089-208	ENST00000541694	LOC102723971	A0A1B0GUV8	181 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	RBFOX3	A6NFN3	312 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694		H3BMM0	161 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694		K7EIL1	84 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	IGKV3-20	P01619	116 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	TCRA	P04437	139 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	CNN1	P51911	297 aa	Known RBP	11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	MEF2B	Q02080	365 aa	Predicted RBP	11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	TOR2A	Q5JU69	321 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	GOLT1A	Q6ZVE7	132 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	ARL6IP6	Q8N6S5	226 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	TXNDC17	Q9BRA2	123 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694	ATG101	Q9BSB4	218 aa		11.09	□□□□□ -0.63
LINC01089-208	ENST00000541694		F6UZH7	168 aa		11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694		K7EQM0	130 aa		11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694	PEX7	O00628	323 aa		11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694	RPL35A	P18077	110 aa	Known RBP	11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694	TRPT1	Q86TN4	253 aa	Known RBP	11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694	CCDC28A	Q8IWP9	274 aa		11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694	CYB561D1	Q8N8Q1	229 aa		11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694	RARRES2	Q99969	163 aa		11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694	TCEAL7	Q9BRU2	100 aa		11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694	EIF5A2	Q9GZV4	153 aa	Known RBP	11.08	□□□□□ -0.64
LINC01089-208	ENST00000541694	SERTM2	A0A1B0GWG4	89 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	RBAKDN	A6NC62	111 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	NPIPB6	E9PJ23	425 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	DEFA6	Q01524	100 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	ERCC8	Q13216	396 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	DEFB121	Q5J5C9	76 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	ZNF506	Q5JVG8	444 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	HIST1H2BA	Q96A08	127 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	FAM210A	Q96ND0	272 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	VGLL1	Q99990	258 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	PPP1R14D	Q9NXH3	145 aa		11.07	□□□□□ -0.64
LINC01089-208	ENST00000541694	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.06	□□□□□ -0.64
LINC01089-208	ENST00000541694	SCO2	A0A1W2PP80	73 aa		11.06	□□□□□ -0.64
LINC01089-208	ENST00000541694	RBMY1B	A6NDE4	496 aa	Known RBP	11.06	□□□□□ -0.64
LINC01089-208	ENST00000541694	RBMY1E	A6NEQ0	496 aa	Known RBP	11.06	□□□□□ -0.64
LINC01089-208	ENST00000541694		A8MZ25	164 aa		11.06	□□□□□ -0.64
LINC01089-208	ENST00000541694	RBMY1D	P0C7P1	496 aa	Known RBP	11.06	□□□□□ -0.64
LINC01089-208	ENST00000541694	AKR1C3	P42330	323 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms