RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 ZNF546Q86UE3 836 aa16.71■□□□□ 0.27
LEMD3-203ENST00000541171 CCDC28AQ8IWP9 274 aa16.71■□□□□ 0.27
LEMD3-203ENST00000541171 OR10J6PQ8NGY7 276 aa16.71■□□□□ 0.27
LEMD3-203ENST00000541171 GNPNAT1Q96EK6 184 aaPredicted RBP16.71■□□□□ 0.27
LEMD3-203ENST00000541171 Q9H8V8 135 aa16.71■□□□□ 0.27
LEMD3-203ENST00000541171 TRAV26-1A0A087WT03 109 aa16.7■□□□□ 0.26
LEMD3-203ENST00000541171 COX7A2P2O60397 106 aa16.7■□□□□ 0.26
LEMD3-203ENST00000541171 BPIFA4PQ86YQ2 179 aa16.7■□□□□ 0.26
LEMD3-203ENST00000541171 MAPKAPK5-AS1Q8N8E1 139 aa16.7■□□□□ 0.26
LEMD3-203ENST00000541171 ZBTB8BQ8NAP8 495 aaPredicted RBP16.7■□□□□ 0.26
LEMD3-203ENST00000541171 SEC22CQ9BRL7 303 aa16.7■□□□□ 0.26
LEMD3-203ENST00000541171 GAGE12BA1L429 117 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 SLC17A3O00476 420 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 TSC22D2O75157 780 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 CDK2AP2O75956 126 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 GAGE7O76087 117 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 GAGE12FP0CL80 117 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 GAGE12GP0CL81 117 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 GAGE12IP0CL82 117 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 DEFA1P59665 94 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 DEFA3P59666 94 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 GFI1BQ5VTD9 330 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 C20orf144Q9BQM9 153 aa16.69■□□□□ 0.26
LEMD3-203ENST00000541171 TAS2R30P59541 319 aa16.68■□□□□ 0.26
LEMD3-203ENST00000541171 MORN5Q5VZ52 161 aa16.68■□□□□ 0.26
LEMD3-203ENST00000541171 C12orf45Q8N5I9 185 aaPredicted RBP16.68■□□□□ 0.26
LEMD3-203ENST00000541171 TMEM37Q8WXS4 190 aa16.68■□□□□ 0.26
LEMD3-203ENST00000541171 RCL1Q9Y2P8 373 aaKnown RBP16.68■□□□□ 0.26
LEMD3-203ENST00000541171 RLN2P04090 185 aa16.67■□□□□ 0.26
LEMD3-203ENST00000541171 M6PRP20645 277 aa16.67■□□□□ 0.26
LEMD3-203ENST00000541171 SPATA12Q7Z6I5 190 aa16.67■□□□□ 0.26
LEMD3-203ENST00000541171 RXFP4Q8TDU9 374 aa16.67■□□□□ 0.26
LEMD3-203ENST00000541171 MGST2Q99735 147 aa16.67■□□□□ 0.26
LEMD3-203ENST00000541171 C7orf66A4D0T2 115 aa16.66■□□□□ 0.26
LEMD3-203ENST00000541171 SNURFLB1AK76 121 aa16.66■□□□□ 0.26
LEMD3-203ENST00000541171 HOXA5P20719 270 aa16.66■□□□□ 0.26
LEMD3-203ENST00000541171 OPCMLQ14982 345 aa16.66■□□□□ 0.26
LEMD3-203ENST00000541171 C10orf113Q5VZT2 155 aa16.66■□□□□ 0.26
LEMD3-203ENST00000541171 NRARPQ7Z6K4 114 aa16.66■□□□□ 0.26
LEMD3-203ENST00000541171 PRAF2O60831 178 aa16.65■□□□□ 0.26
LEMD3-203ENST00000541171 MBPP02686 304 aaPredicted RBP16.65■□□□□ 0.26
LEMD3-203ENST00000541171 LINC00612Q8N6U2 182 aa16.65■□□□□ 0.26
LEMD3-203ENST00000541171 GGACTQ9BVM4 153 aa16.65■□□□□ 0.26
LEMD3-203ENST00000541171 KRTAP1-5Q9BYS1 174 aa16.65■□□□□ 0.26
LEMD3-203ENST00000541171 GPN1Q9HCN4 374 aaPredicted RBP16.65■□□□□ 0.26
LEMD3-203ENST00000541171 PXMP4Q9Y6I8 212 aa16.65■□□□□ 0.26
LEMD3-203ENST00000541171 TRAV5A0A0B4J249 113 aa16.64■□□□□ 0.25
LEMD3-203ENST00000541171 TRAV12-3A0A0B4J271 114 aa16.64■□□□□ 0.25
LEMD3-203ENST00000541171 H3BQ15 152 aa16.64■□□□□ 0.25
LEMD3-203ENST00000541171 L7N2F9 121 aa16.64■□□□□ 0.25
LEMD3-203ENST00000541171 VAMP2P63027 116 aa16.64■□□□□ 0.25
LEMD3-203ENST00000541171 ESRGQ1W209 222 aa16.64■□□□□ 0.25
LEMD3-203ENST00000541171 CCSO14618 274 aa16.63■□□□□ 0.25
LEMD3-203ENST00000541171 CT45A10P0DMU9 189 aa16.63■□□□□ 0.25
LEMD3-203ENST00000541171 IGLC2P0DOY2 106 aa16.63■□□□□ 0.25
LEMD3-203ENST00000541171 CAMLGP49069 296 aa16.63■□□□□ 0.25
LEMD3-203ENST00000541171 BCAP31P51572 246 aa16.63■□□□□ 0.25
LEMD3-203ENST00000541171 TTC32Q5I0X7 151 aa16.63■□□□□ 0.25
LEMD3-203ENST00000541171 SAT2Q96F10 170 aaPredicted RBP16.63■□□□□ 0.25
LEMD3-203ENST00000541171 DNAJC4Q9NNZ3 241 aa16.63■□□□□ 0.25
LEMD3-203ENST00000541171 LEPP41159 167 aa16.62■□□□□ 0.25
LEMD3-203ENST00000541171 ZNF503Q96F45 646 aa16.62■□□□□ 0.25
LEMD3-203ENST00000541171 MARVELD1Q9BSK0 173 aa16.62■□□□□ 0.25
LEMD3-203ENST00000541171 LSM5Q9Y4Y9 91 aaKnown RBP16.62■□□□□ 0.25
LEMD3-203ENST00000541171 INMT-MINDY4F8WBC2 141 aa16.61■□□□□ 0.25
LEMD3-203ENST00000541171 MIC13Q5XKP0 118 aa16.61■□□□□ 0.25
LEMD3-203ENST00000541171 Q6ZRG5 221 aa16.61■□□□□ 0.25
LEMD3-203ENST00000541171 C2orf50Q96LR7 162 aa16.61■□□□□ 0.25
LEMD3-203ENST00000541171 Q9H3A6 140 aa16.61■□□□□ 0.25
LEMD3-203ENST00000541171 TMPRSS5Q9H3S3 457 aa16.61■□□□□ 0.25
LEMD3-203ENST00000541171 C5orf51A6NDU8 294 aa16.6■□□□□ 0.25
LEMD3-203ENST00000541171 FAM25EA8MYX2 175 aa16.6■□□□□ 0.25
LEMD3-203ENST00000541171 RAB31Q13636 194 aa16.6■□□□□ 0.25
LEMD3-203ENST00000541171 Q6ZTI0 123 aa16.6■□□□□ 0.25
LEMD3-203ENST00000541171 DNAH5Q8TE73 4624 aa16.6■□□□□ 0.25
LEMD3-203ENST00000541171 APOBP04114 4563 aaKnown RBP16.59■□□□□ 0.25
LEMD3-203ENST00000541171 NPIPB6E9PJ23 425 aa16.59■□□□□ 0.25
LEMD3-203ENST00000541171 CST7O76096 145 aa16.59■□□□□ 0.25
LEMD3-203ENST00000541171 CAV2P51636 162 aa16.59■□□□□ 0.25
LEMD3-203ENST00000541171 UPK3BQ9BT76 320 aa16.59■□□□□ 0.25
LEMD3-203ENST00000541171 GUK1Q16774 197 aa16.58■□□□□ 0.24
LEMD3-203ENST00000541171 OR1L4Q8NGR5 311 aa16.58■□□□□ 0.24
LEMD3-203ENST00000541171 ODF3Q96PU9 254 aa16.58■□□□□ 0.24
LEMD3-203ENST00000541171 PYGO2Q9BRQ0 406 aa16.58■□□□□ 0.24
LEMD3-203ENST00000541171 ZNF586Q9NXT0 402 aa16.58■□□□□ 0.24
LEMD3-203ENST00000541171 MRPS16Q9Y3D3 137 aaKnown RBP16.58■□□□□ 0.24
LEMD3-203ENST00000541171 FAM24AA6NFZ4 105 aa16.57■□□□□ 0.24
LEMD3-203ENST00000541171 KRTAP10-2P60368 255 aa16.57■□□□□ 0.24
LEMD3-203ENST00000541171 ERCC8Q13216 396 aa16.57■□□□□ 0.24
LEMD3-203ENST00000541171 GSN-AS1Q9NRJ2 163 aa16.57■□□□□ 0.24
LEMD3-203ENST00000541171 TRGV2A0A075B6R0 118 aa16.56■□□□□ 0.24
LEMD3-203ENST00000541171 H3BNG1 76 aa16.56■□□□□ 0.24
LEMD3-203ENST00000541171 DAZ2Q13117 558 aaKnown RBP16.56■□□□□ 0.24
LEMD3-203ENST00000541171 IL15RAQ13261 267 aa16.56■□□□□ 0.24
LEMD3-203ENST00000541171 Q8N1X5 172 aa16.56■□□□□ 0.24
LEMD3-203ENST00000541171 SCRT2Q9NQ03 307 aa16.56■□□□□ 0.24
LEMD3-203ENST00000541171 UQCC1Q9NVA1 299 aa16.56■□□□□ 0.24
LEMD3-203ENST00000541171 WDR83OSQ9Y284 106 aa16.56■□□□□ 0.24
LEMD3-203ENST00000541171 A0A1W2PPQ1 181 aa16.55■□□□□ 0.24
LEMD3-203ENST00000541171 M0R3E3 92 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms