RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 NEU4Q8WWR8 484 aaPredicted RBP7.83□□□□□ -1.16
PHC1-208ENST00000540574 DUX5Q96PT3 197 aa7.83□□□□□ -1.16
PHC1-208ENST00000540574 KAAG1Q9UBP8 84 aa7.83□□□□□ -1.16
PHC1-208ENST00000540574 PTPRBP23467 1997 aa7.83□□□□□ -1.16
PHC1-208ENST00000540574 TRAV30A0A087WSZ9 112 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 IGLV1-47P01700 117 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 IGLV2-8P01709 118 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 COA6Q5JTJ3 125 aaKnown RBP7.82□□□□□ -1.16
PHC1-208ENST00000540574 METTL26Q96S19 204 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 TP53TG3Q9ULZ0 132 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 RNF114Q9Y508 228 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 SMIM27A0A1W2PRY6 76 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 PRTN3P24158 256 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 SP5Q6BEB4 398 aaPredicted RBP7.82□□□□□ -1.16
PHC1-208ENST00000540574 HSPB8Q9UJY1 196 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 MSRB2Q9Y3D2 182 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 ATP6V0E1O15342 81 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 NUTF2P61970 127 aaKnown RBP7.82□□□□□ -1.16
PHC1-208ENST00000540574 ZNF491Q8N8L2 437 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 C7orf69Q9H7B7 122 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 JMJD1CQ15652 2540 aa7.82□□□□□ -1.16
PHC1-208ENST00000540574 FBLL1A6NHQ2 334 aaKnown RBP7.81□□□□□ -1.16
PHC1-208ENST00000540574 M0QZK8 103 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 TOMM40O96008 361 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 S100A7P31151 101 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 ADORA2A-AS1P86434 159 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 Q0VG73 95 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 TMEM249Q2WGJ8 235 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 HIST1H1AQ02539 215 aaPredicted RBP7.81□□□□□ -1.16
PHC1-208ENST00000540574 PVRIGQ6DKI7 326 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 CLEC2AQ6UVW9 174 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 FER1L6-AS1Q8NA97 138 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 BEND2Q8NDZ0 799 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 IGF2BP2-AS1Q96M15 143 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 ALKBH7Q9BT30 221 aaPredicted RBP7.81□□□□□ -1.16
PHC1-208ENST00000540574 TRBV19A0A075B6N1 114 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 TEX22C9J3V5 150 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 K7EIM0 57 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 FAM71F2Q6NXP2 309 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 THAP8Q8NA92 274 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 OR10AG1Q8NH19 301 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 GTSF1Q8WW33 167 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 SHANK2-AS3Q9BTD1 123 aa7.81□□□□□ -1.16
PHC1-208ENST00000540574 FN1P02751 2386 aaKnown RBP7.81□□□□□ -1.16
PHC1-208ENST00000540574 C7orf71A4D174 169 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 ZFP36P26651 326 aaKnown RBP7.8□□□□□ -1.16
PHC1-208ENST00000540574 IFI27P40305 119 aaPredicted RBP7.8□□□□□ -1.16
PHC1-208ENST00000540574 ATP5G2Q06055 141 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 GDF5OSQ5U4N7 250 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 BMI1P35226 326 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 DYNAPQ8N1N2 210 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 VGLL1Q99990 258 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 SH2D1AO60880 128 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 GP9P14770 177 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 DEFB1P60022 68 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 CACNG7P62955 275 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 PSG9Q00887 426 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 PSG3Q16557 428 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 LDLRAD2Q5SZI1 272 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 EBLN2Q6P2I7 272 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 IGF2-ASQ6U949 168 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 ZNF562Q6V9R5 426 aa7.8□□□□□ -1.16
PHC1-208ENST00000540574 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.79□□□□□ -1.16
PHC1-208ENST00000540574 NRGNQ92686 78 aa7.79□□□□□ -1.16
PHC1-208ENST00000540574 A0A087X0K7 114 aa7.79□□□□□ -1.16
PHC1-208ENST00000540574 CCL19Q99731 98 aa7.79□□□□□ -1.16
PHC1-208ENST00000540574 TRAV9-2A0A087WT02 112 aa7.79□□□□□ -1.16
PHC1-208ENST00000540574 I3L2K1 104 aa7.79□□□□□ -1.16
PHC1-208ENST00000540574 IGLL1P15814 213 aa7.79□□□□□ -1.16
PHC1-208ENST00000540574 LBHQ53QV2 105 aaPredicted RBP7.79□□□□□ -1.16
PHC1-208ENST00000540574 MPV17L2Q567V2 206 aa7.79□□□□□ -1.16
PHC1-208ENST00000540574 CSMD1Q96PZ7 3565 aa7.79□□□□□ -1.16
PHC1-208ENST00000540574 LINC01548A6NM66 108 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 SAPCD1Q5SSQ6 148 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 FAM74A4Q5TZK3 123 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 EEF1AKMT3Q96AZ1 226 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 C2orf88Q9BSF0 95 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 ZFP30Q9Y2G7 519 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 H3BUX3 64 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 NPSP0C0P6 89 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 ORMDL3Q8N138 153 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 ANKRD17O75179 2603 aaKnown RBP7.78□□□□□ -1.16
PHC1-208ENST00000540574 STPG4Q8N801 248 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 VPS25Q9BRG1 176 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 TMEM208Q9BTX3 173 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 TMEM160Q9NX00 188 aa7.78□□□□□ -1.16
PHC1-208ENST00000540574 IGHV1-24A0A0C4DH33 117 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 H3BVH4 76 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 SMIM17P0DL12 118 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 FABP5P3A8MUU1 101 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 SYS1-DBNDD2H3BUS1 97 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 EFNA4P52798 201 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 TRAV8-6A0A0B4J262 113 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 IGLC2P0DOY2 106 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 IGLC3P0DOY3 106 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 LINC00310P59036 64 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 IL17RELQ6ZVW7 336 aa7.77□□□□□ -1.17
PHC1-208ENST00000540574 ZNF414Q96IQ9 312 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms