RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 OBSL1O75147 1896 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 RTL9Q8NET4 1388 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 NCOA6Q14686 2063 aaPredicted RBP0.58□□□□□ -2.32
CCDC7-209ENST00000539197 E7EQ34 232 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 H0YJX3 145 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 PPYP01298 95 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 MRPS36P82909 103 aaKnown RBP0.58□□□□□ -2.32
CCDC7-209ENST00000539197 TFAMQ00059 246 aaKnown RBP0.58□□□□□ -2.32
CCDC7-209ENST00000539197 DIAPH2-AS1Q14236 149 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 TMEM128Q5BJH2 165 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 HAGHLQ6PII5 290 aaPredicted RBP0.58□□□□□ -2.32
CCDC7-209ENST00000539197 FOXI2Q6ZQN5 318 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 SMIM15Q7Z3B0 74 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 LINC00305Q7Z4B0 112 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 TEX29Q8N6K0 151 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 OR5H6Q8NGV6 325 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 OR10AG1Q8NH19 301 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 PSMF1Q92530 271 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 DIRC1Q969H9 104 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 OR4C12Q96R67 309 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 TCEAL2Q9H3H9 227 aaPredicted RBP0.58□□□□□ -2.32
CCDC7-209ENST00000539197 MRPL40Q9NQ50 206 aaKnown RBP0.58□□□□□ -2.32
CCDC7-209ENST00000539197 TPRKBQ9Y3C4 175 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 MED31Q9Y3C7 131 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 DENND4CQ5VZ89 1909 aa0.58□□□□□ -2.32
CCDC7-209ENST00000539197 FRMPD1Q5SYB0 1578 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 DOCK4Q8N1I0 1966 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 EXPH5Q8NEV8 1989 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 TNRC6BQ9UPQ9 1833 aaKnown RBP0.57□□□□□ -2.32
CCDC7-209ENST00000539197 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.57□□□□□ -2.32
CCDC7-209ENST00000539197 TRAV23DV6A0A075B6W5 121 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 PFDN1O60925 122 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 FABP4P15090 132 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 POLR2HP52434 150 aaKnown RBP0.57□□□□□ -2.32
CCDC7-209ENST00000539197 NDUFA6P56556 154 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 ZCCHC23Q6ZST2 131 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 LINC00269Q8N2A0 174 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 Q8N6K4 173 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 PLPP5Q8NEB5 264 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 OR4B1Q8NGF8 309 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 CCL4L1Q8NHW4 92 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 CCDC115Q96NT0 180 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 LIMD2Q9BT23 127 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 DDA1Q9BW61 102 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 CST11Q9H112 138 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 FKBP11Q9NYL4 201 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 NDUFAF1Q9Y375 327 aa0.57□□□□□ -2.32
CCDC7-209ENST00000539197 MGAMO43451 1857 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 TRAPPC8Q9Y2L5 1435 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 COL1A1P02452 1464 aaPredicted RBP0.56□□□□□ -2.32
CCDC7-209ENST00000539197 A0A096LPI6 279 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 IGLV3-32A0A0A0MS00 114 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 TRAV13-1A0A0B4J241 112 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 TRBV27A0A0K0K1C4 114 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 C5orf58C9J3I9 102 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 JMJD7-PLA2G4BH0Y9G9 81 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 H3BMG7 143 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 RPS3P23396 243 aaKnown RBP eCLIP0.56□□□□□ -2.32
CCDC7-209ENST00000539197 S100GP29377 79 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 FOXA3P55318 350 aaPredicted RBP0.56□□□□□ -2.32
CCDC7-209ENST00000539197 SAMD13Q5VXD3 122 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.56□□□□□ -2.32
CCDC7-209ENST00000539197 CLEC2BQ92478 149 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 PRELID3AQ96N28 172 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 MCEEQ96PE7 176 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 EML6Q6ZMW3 1958 aa0.56□□□□□ -2.32
CCDC7-209ENST00000539197 BCL9O00512 1426 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 MYO5AQ9Y4I1 1855 aaKnown RBP0.55□□□□□ -2.32
CCDC7-209ENST00000539197 LOC107984156A0A0G2JMH3 177 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 C3orf85A0A1B0GTC6 90 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 GNG14A0A1W2PPG7 69 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 PRORSD1PA6NEY8 169 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 M0QZK8 103 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 FAM107AO95990 144 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 CD14P08571 375 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 TPT1P13693 172 aaKnown RBP0.55□□□□□ -2.32
CCDC7-209ENST00000539197 MAXP61244 160 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 GLIPR1L1Q6UWM5 242 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 ARL17AQ8IVW1 177 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 OR9Q1Q8NGQ5 310 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 NABP2Q9BQ15 211 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 LXNQ9BS40 222 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 CBLN4Q9NTU7 201 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 CEP192Q8TEP8 1941 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 SCN3AQ9NY46 2000 aa0.55□□□□□ -2.32
CCDC7-209ENST00000539197 NCAPD3P42695 1498 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 NISCHQ9Y2I1 1504 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 MYH7BA7E2Y1 1941 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 LOC107984640A0A0U1RRK4 108 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 IGLV3-1P01715 115 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 IGHV3-33P01772 117 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 TRACP01848 142 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 NBEAP1P0C6P0 100 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 FXYD4P59646 89 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 NEDD8Q15843 81 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 SPATA45Q537H7 98 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 OCIAD2Q56VL3 154 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 TOMM20LQ6UXN7 152 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 TAC4Q86UU9 113 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 SBSPONQ8IVN8 264 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms