RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 H3BUA1 57 aa12.1□□□□□ -0.47
MKS1-204ENST00000537529 APOHP02749 345 aaPredicted RBP12.1□□□□□ -0.47
MKS1-204ENST00000537529 NRGNQ92686 78 aa12.1□□□□□ -0.47
MKS1-204ENST00000537529 PRR25Q96S07 402 aa12.1□□□□□ -0.47
MKS1-204ENST00000537529 NRN1Q9NPD7 142 aa12.1□□□□□ -0.47
MKS1-204ENST00000537529 SH2D1AO60880 128 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 BRI3O95415 125 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 IGHG2P01859 326 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 LCN12Q6JVE5 192 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 BORCS7Q96B45 105 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 DOPEY1Q5JWR5 2465 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 AKAP6Q13023 2319 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 TMEM189A5PLL7 270 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 IGHG4P01861 327 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 HLA-DMBP28068 263 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 IGFL4Q6B9Z1 124 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 NDFIP1Q9BT67 221 aa12.09□□□□□ -0.47
MKS1-204ENST00000537529 IGHV3-66A0A0C4DH42 116 aa12.08□□□□□ -0.48
MKS1-204ENST00000537529 CD33P20138 364 aa12.08□□□□□ -0.48
MKS1-204ENST00000537529 ARL3P36405 182 aa12.08□□□□□ -0.48
MKS1-204ENST00000537529 KRTDAPP60985 99 aa12.08□□□□□ -0.48
MKS1-204ENST00000537529 BBC3Q96PG8 261 aaPredicted RBP12.08□□□□□ -0.48
MKS1-204ENST00000537529 VGLL1Q99990 258 aa12.08□□□□□ -0.48
MKS1-204ENST00000537529 U3KQE9 123 aa12.08□□□□□ -0.48
MKS1-204ENST00000537529 LOC102724200A0A096LPH7 203 aaPredicted RBP12.07□□□□□ -0.48
MKS1-204ENST00000537529 HSBP1O75506 76 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 FAM209BQ5JX69 171 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 RNASEKQ6P5S7 137 aaKnown RBP12.07□□□□□ -0.48
MKS1-204ENST00000537529 REC114Q7Z4M0 266 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 USMG5Q96IX5 58 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 CFAP46Q8IYW2 2715 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 RBAKDNA6NC62 111 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 ARMS2P0C7Q2 107 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 NTF3P20783 257 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 BMI1P35226 326 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 TEX43Q6ZNM6 134 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 GATD1Q8NB37 220 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 Q8TAT8 98 aa12.07□□□□□ -0.48
MKS1-204ENST00000537529 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
MKS1-204ENST00000537529 ZNF207O43670 478 aaKnown RBP12.06□□□□□ -0.48
MKS1-204ENST00000537529 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
MKS1-204ENST00000537529 NIT1Q86X76 327 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 ZNF843Q8N446 348 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 KIR2DL5BA0A0G2JN68 375 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 KIR2DL5BA0A0G2JPC4 375 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 AVPP01185 164 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 PPIFP30405 207 aaKnown RBP12.06□□□□□ -0.48
MKS1-204ENST00000537529 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 KIR2DL5AQ8N109 375 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 FAM19A2Q8N3H0 131 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 MRPL53Q96EL3 112 aaKnown RBP12.06□□□□□ -0.48
MKS1-204ENST00000537529 C14orf144Q96I85 54 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 TPPP3Q9BW30 176 aa12.06□□□□□ -0.48
MKS1-204ENST00000537529 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
MKS1-204ENST00000537529 IGHV3-49A0A0A0MS15 119 aa12.05□□□□□ -0.48
MKS1-204ENST00000537529 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
MKS1-204ENST00000537529 J3QLI3 93 aa12.05□□□□□ -0.48
MKS1-204ENST00000537529 RNF182Q8N6D2 247 aa12.05□□□□□ -0.48
MKS1-204ENST00000537529 RNF114Q9Y508 228 aa12.05□□□□□ -0.48
MKS1-204ENST00000537529 NDUFA4O00483 81 aa12.04□□□□□ -0.48
MKS1-204ENST00000537529 TMSB15BA0A087X1C1 80 aa12.04□□□□□ -0.48
MKS1-204ENST00000537529 M0R2Z0 102 aa12.04□□□□□ -0.48
MKS1-204ENST00000537529 SRSF2Q01130 221 aaKnown RBP12.04□□□□□ -0.48
MKS1-204ENST00000537529 C8orf86Q6ZUL3 223 aa12.04□□□□□ -0.48
MKS1-204ENST00000537529 CHCHD1Q96BP2 118 aaKnown RBP12.04□□□□□ -0.48
MKS1-204ENST00000537529 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
MKS1-204ENST00000537529 A0A096LNT2 108 aa12.03□□□□□ -0.48
MKS1-204ENST00000537529 PRAC2D3DTV9 90 aa12.03□□□□□ -0.48
MKS1-204ENST00000537529 PF4V1P10720 104 aa12.03□□□□□ -0.48
MKS1-204ENST00000537529 BLCAPP62952 87 aa12.03□□□□□ -0.48
MKS1-204ENST00000537529 ERCC8Q13216 396 aa12.03□□□□□ -0.48
MKS1-204ENST00000537529 VAMP8Q9BV40 100 aa12.03□□□□□ -0.48
MKS1-204ENST00000537529 CLEC5AQ9NY25 188 aa12.03□□□□□ -0.48
MKS1-204ENST00000537529 ACACBO00763 2458 aa12.03□□□□□ -0.48
MKS1-204ENST00000537529 TRAV8-2A0A0B4J237 113 aa12.02□□□□□ -0.48
MKS1-204ENST00000537529 A1L4Q6 167 aa12.02□□□□□ -0.48
MKS1-204ENST00000537529 LYZL1Q6UWQ5 148 aa12.02□□□□□ -0.48
MKS1-204ENST00000537529 GLMPQ8WWB7 406 aa12.02□□□□□ -0.48
MKS1-204ENST00000537529 A0A0G2JLM5 398 aa12.02□□□□□ -0.49
MKS1-204ENST00000537529 C3orf79P0CE67 100 aa12.02□□□□□ -0.49
MKS1-204ENST00000537529 ZNF80P51504 273 aaPredicted RBP12.02□□□□□ -0.49
MKS1-204ENST00000537529 Q8N976 141 aa12.02□□□□□ -0.49
MKS1-204ENST00000537529 ZNF580Q9UK33 172 aa12.02□□□□□ -0.49
MKS1-204ENST00000537529 FAM181BA6NEQ2 426 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 IGLV1-40P01703 118 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 TRBV12-3P01733 135 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 SRSF1Q07955 248 aaKnown RBP eCLIP12.01□□□□□ -0.49
MKS1-204ENST00000537529 DMRTA1Q5VZB9 504 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 ZNF493Q6ZR52 646 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 URB1-AS1Q96HZ7 61 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 FABP5P3A8MUU1 101 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 CTRLP40313 264 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 CYB5R2Q6BCY4 276 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 C9orf139Q6ZV77 190 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 FER1L6-AS1Q8NA97 138 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 C20orf144Q9BQM9 153 aa12.01□□□□□ -0.49
MKS1-204ENST00000537529 IGHV3-11P01762 117 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms