RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 C16orf90A8MZG2 172 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 J3KRW8 73 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 ZNF701M0R085 212 aaPredicted RBP5.88□□□□□ -1.47
USP28-203ENST00000537490 PLA2G10O15496 165 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 CT45A10P0DMU9 189 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 IGLC2P0DOY2 106 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 IL7P13232 177 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 CLINT1Q14677 625 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 C10orf113Q5VZT2 155 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 MIC13Q5XKP0 118 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 OR10J6PQ8NGY7 276 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 C20orf144Q9BQM9 153 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 C11orf1Q9H5F2 150 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 Q9H8V8 135 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 DNAJC4Q9NNZ3 241 aa5.88□□□□□ -1.47
USP28-203ENST00000537490 LSM5Q9Y4Y9 91 aaKnown RBP5.88□□□□□ -1.47
USP28-203ENST00000537490 TRAV26-1A0A087WT03 109 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 A0A0J9YY99 117 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 GAGE12BA1L429 117 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 FAM24AA6NFZ4 105 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 L7N2F9 121 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 GAGE7O76087 117 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 CST7O76096 145 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 GAGE12FP0CL80 117 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 GAGE12GP0CL81 117 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 GAGE12IP0CL82 117 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 HOXA5P20719 270 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 CAMLGP49069 296 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 BCAP31P51572 246 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 VAMP2P63027 116 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 NRARPQ7Z6K4 114 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 CCDC28AQ8IWP9 274 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 RXFP4Q8TDU9 374 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 ZNF431Q8TF32 576 aaPredicted RBP5.87□□□□□ -1.47
USP28-203ENST00000537490 GNPNAT1Q96EK6 184 aaPredicted RBP5.87□□□□□ -1.47
USP28-203ENST00000537490 KRTAP1-5Q9BYS1 174 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 ZNF586Q9NXT0 402 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 PXMP4Q9Y6I8 212 aa5.87□□□□□ -1.47
USP28-203ENST00000537490 TRAV12-3A0A0B4J271 114 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 FAM25EA8MYX2 175 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 NPIPB6E9PJ23 425 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 M6PRP20645 277 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 CAV2P51636 162 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 ZNF846Q147U1 533 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 ESRGQ1W209 222 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 CNPY1Q3B7I2 92 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 Q6ZRG5 221 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 SEC22CQ9BRL7 303 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 C20orf85Q9H1P6 137 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 WDR83OSQ9Y284 106 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
USP28-203ENST00000537490 TRAV6A0A075B6T7 132 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 C5orf51A6NDU8 294 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 SNURFLB1AK76 121 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 M0R3E3 92 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 LYRM1O43325 122 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 CDK2AP2O75956 126 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 RLN2P04090 185 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 TCRBP04435 133 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 LEPP41159 167 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 RPL29P47914 159 aaKnown RBP5.85□□□□□ -1.47
USP28-203ENST00000537490 ERCC8Q13216 396 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 IL15RAQ13261 267 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 RAB31Q13636 194 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 GUK1Q16774 197 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 VWC2Q2TAL6 325 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 Q6ZTI0 123 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 OR1L4Q8NGR5 311 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 ZNF503Q96F45 646 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 C2orf50Q96LR7 162 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 ODF3Q96PU9 254 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 PYGO2Q9BRQ0 406 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 SLC39A9Q9NUM3 307 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 UQCC1Q9NVA1 299 aa5.85□□□□□ -1.47
USP28-203ENST00000537490 TRBV19A0A075B6N1 114 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 IGSF23A1L1A6 192 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 ZNF253O75346 499 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 NDUFB4O95168 129 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 BAXQ07812 192 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 DAZ2Q13117 558 aaKnown RBP5.84□□□□□ -1.47
USP28-203ENST00000537490 SPATA12Q7Z6I5 190 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 C12orf45Q8N5I9 185 aaPredicted RBP5.84□□□□□ -1.47
USP28-203ENST00000537490 TMEM252Q8N6L7 170 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 VSIG2Q96IQ7 327 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 PFDN5Q99471 154 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 UPK3BQ9BT76 320 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 AGPAT4-IT1Q9H0P7 198 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 TMPRSS5Q9H3S3 457 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 GSN-AS1Q9NRJ2 163 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 RYR1P21817 5038 aa5.84□□□□□ -1.47
USP28-203ENST00000537490 A0A096LPF7 62 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 UBE2L5PA0A1B0GUS4 154 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 C7orf71A4D174 169 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 H3BNG1 76 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 ZNF324O75467 553 aaPredicted RBP5.83□□□□□ -1.48
USP28-203ENST00000537490 SLC25A5P05141 298 aaKnown RBP5.83□□□□□ -1.48
USP28-203ENST00000537490 PYYP10082 97 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 HIST1H1EP10412 219 aaKnown RBP5.83□□□□□ -1.48
USP28-203ENST00000537490 S100A11P31949 105 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 SULT1A1P50225 295 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms