RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 EGR2P11161 476 aaPredicted RBP11.16□□□□□ -0.62
USP44-203ENST00000537435 EBI3Q14213 229 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 IGFL4Q6B9Z1 124 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 SLC25A34Q6PIV7 304 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 PRR25Q96S07 402 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 COX11Q9Y6N1 276 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 CSMD1Q96PZ7 3565 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 IGHV3OR16-8A0A075B7F1 116 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 MUC21A0A0G2JKD1 596 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 MUC21A0A140T8X8 626 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 IFI27P40305 119 aaPredicted RBP11.16□□□□□ -0.62
USP44-203ENST00000537435 KLRB1Q12918 225 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 FAM106AQ4KMX7 169 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 MUC21Q5SSG8 566 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 SAPCD1Q5SSQ6 148 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 MINOS1Q5TGZ0 78 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 LINC01545Q5VT33 79 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 AMN1Q8IY45 258 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 OR10AG1Q8NH19 301 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 Q8TAT8 98 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 SMAD5-AS1Q9Y6J3 95 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 MINOS1-NBL1R4GNA1 71 aa11.16□□□□□ -0.62
USP44-203ENST00000537435 IGHV3-35A0A0C4DH35 117 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 SCGB2A1O75556 95 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 SCRT2Q9NQ03 307 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 MPV17L2Q567V2 206 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 FAM104BQ5XKR9 115 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 COX8CQ7Z4L0 72 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 Q8N9W7 124 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 ZNF738Q8NE65 137 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 VGLL1Q99990 258 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 MSRB2Q9Y3D2 182 aa11.15□□□□□ -0.62
USP44-203ENST00000537435 LOXL1Q08397 574 aaPredicted RBP11.14□□□□□ -0.63
USP44-203ENST00000537435 NBASA2RRP1 2371 aa11.14□□□□□ -0.63
USP44-203ENST00000537435 NCR2O95944 276 aa11.14□□□□□ -0.63
USP44-203ENST00000537435 IGHG4P01861 327 aa11.14□□□□□ -0.63
USP44-203ENST00000537435 ZNF80P51504 273 aaPredicted RBP11.14□□□□□ -0.63
USP44-203ENST00000537435 ARL6IP6Q8N6S5 226 aa11.14□□□□□ -0.63
USP44-203ENST00000537435 PRELID3AQ96N28 172 aa11.14□□□□□ -0.63
USP44-203ENST00000537435 MS4A6AQ9H2W1 248 aa11.14□□□□□ -0.63
USP44-203ENST00000537435 SIGLEC8Q9NYZ4 499 aa11.14□□□□□ -0.63
USP44-203ENST00000537435 RAXQ9Y2V3 346 aa11.14□□□□□ -0.63
USP44-203ENST00000537435 U3KQK5 164 aa11.14□□□□□ -0.63
USP44-203ENST00000537435 A0A096LNJ9 63 aa11.13□□□□□ -0.63
USP44-203ENST00000537435 NDUFS7O75251 213 aa11.13□□□□□ -0.63
USP44-203ENST00000537435 PTTG1IPP53801 180 aa11.13□□□□□ -0.63
USP44-203ENST00000537435 ORMDL3Q8N138 153 aa11.13□□□□□ -0.63
USP44-203ENST00000537435 CCL25O15444 150 aa11.13□□□□□ -0.63
USP44-203ENST00000537435 NUDT3O95989 172 aa11.13□□□□□ -0.63
USP44-203ENST00000537435 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
USP44-203ENST00000537435 DTX2Q86UW9 622 aa11.13□□□□□ -0.63
USP44-203ENST00000537435 SIRPDQ9H106 197 aa11.13□□□□□ -0.63
USP44-203ENST00000537435 FBLL1A6NHQ2 334 aaKnown RBP11.12□□□□□ -0.63
USP44-203ENST00000537435 GPR183P32249 361 aa11.12□□□□□ -0.63
USP44-203ENST00000537435 BMI1P35226 326 aa11.12□□□□□ -0.63
USP44-203ENST00000537435 FER1L6-AS1Q8NA97 138 aa11.12□□□□□ -0.63
USP44-203ENST00000537435 A0A1W2PPR1 153 aa11.12□□□□□ -0.63
USP44-203ENST00000537435 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
USP44-203ENST00000537435 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
USP44-203ENST00000537435 RPS20P60866 119 aaKnown RBP11.11□□□□□ -0.63
USP44-203ENST00000537435 TWIST1Q15672 202 aa11.11□□□□□ -0.63
USP44-203ENST00000537435 C15orf32Q32M92 178 aa11.11□□□□□ -0.63
USP44-203ENST00000537435 BVES-AS1Q5T3Y7 98 aa11.11□□□□□ -0.63
USP44-203ENST00000537435 UCNP55089 124 aa11.11□□□□□ -0.63
USP44-203ENST00000537435 UBE2V1Q13404 147 aa11.11□□□□□ -0.63
USP44-203ENST00000537435 FAM110DQ8TAY7 271 aaPredicted RBP11.11□□□□□ -0.63
USP44-203ENST00000537435 ZNF502Q8TBZ5 544 aa11.11□□□□□ -0.63
USP44-203ENST00000537435 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 IGLC6P0CF74 106 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 FXYD7P58549 80 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 WNK2Q9Y3S1 2297 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 MED13LQ71F56 2210 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 ATP6V0E1O15342 81 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 CLEC3BP05452 202 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 S100A7P31151 101 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 ERCC8Q13216 396 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 ZNF575Q86XF7 245 aa11.1□□□□□ -0.63
USP44-203ENST00000537435 HRNRQ86YZ3 2850 aaPredicted RBP11.09□□□□□ -0.63
USP44-203ENST00000537435 NPYP01303 97 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 ORM1P02763 201 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 CKS2P33552 79 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 RHOGP84095 191 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 C12orf54Q6X4T0 127 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 A0A087X0K7 114 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 IGHV2-70DA0A0C4DH43 119 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 COX8AP10176 69 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 AJUBAQ96IF1 538 aa11.09□□□□□ -0.63
USP44-203ENST00000537435 BUB3O43684 328 aa11.08□□□□□ -0.64
USP44-203ENST00000537435 UBE2E1P51965 193 aa11.08□□□□□ -0.64
USP44-203ENST00000537435 HIST1H1AQ02539 215 aaPredicted RBP11.08□□□□□ -0.64
USP44-203ENST00000537435 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
USP44-203ENST00000537435 MSRB1Q9NZV6 116 aa11.08□□□□□ -0.64
USP44-203ENST00000537435 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
USP44-203ENST00000537435 FABP5P3A8MUU1 101 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms