RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ODF3Q96PU9 254 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 LYSMD1Q96S90 227 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 GPER1Q99527 375 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 TMEM70Q9BUB7 260 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 SH3BGRL3Q9H299 93 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 QRICH2Q9H0J4 1663 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 CASZ1Q86V15 1759 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 LRRC37A3O60309 1634 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 TRPM1Q7Z4N2 1603 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 ATP7BP35670 1465 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 QSER1Q2KHR3 1735 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 MON2Q7Z3U7 1717 aa1.69□□□□□ -2.14
PRKDC-208ENST00000536710 PCDH15Q96QU1 1955 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 OTOGLQ3ZCN5 2332 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 PIK3C2AO00443 1686 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 ANKARQ7Z5J8 1434 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 YTHDC2Q9H6S0 1430 aaKnown RBP1.68□□□□□ -2.14
PRKDC-208ENST00000536710 TULP4Q9NRJ4 1543 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 TMEM238C9JI98 176 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 E5RI56 91 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 DHFRP00374 187 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 LYG2Q86SG7 212 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 Q8N814 137 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 HOPXQ9BPY8 73 aaPredicted RBP1.68□□□□□ -2.14
PRKDC-208ENST00000536710 MRPL57Q9BQC6 102 aaKnown RBP1.68□□□□□ -2.14
PRKDC-208ENST00000536710 CDC42SE1Q9NRR8 79 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 LY96Q9Y6Y9 160 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 EIF3AQ14152 1382 aaKnown RBP1.68□□□□□ -2.14
PRKDC-208ENST00000536710 RALGAPBQ86X10 1494 aa1.68□□□□□ -2.14
PRKDC-208ENST00000536710 RP1L1Q8IWN7 2480 aaPredicted RBP1.67□□□□□ -2.14
PRKDC-208ENST00000536710 LTN1O94822 1766 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 DISP2A7MBM2 1401 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 TNS3Q68CZ2 1445 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 PAPPAQ13219 1627 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 ANKRD26Q9UPS8 1709 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 TCRBV4S1A1TA0A5B7 111 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 ZNF736B4DX44 427 aaPredicted RBP1.67□□□□□ -2.14
PRKDC-208ENST00000536710 HLA-EP13747 358 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 ST6GALNAC3Q8NDV1 305 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 ZHX1-C8orf76Q96EF9 292 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 TEX37Q96LM6 180 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 IL20Q9NYY1 176 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 ZFP30Q9Y2G7 519 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 UFC1Q9Y3C8 167 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 PLXND1Q9Y4D7 1925 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 NHSQ6T4R5 1651 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 FAM208AQ9UK61 1670 aaKnown RBP1.67□□□□□ -2.14
PRKDC-208ENST00000536710 RGPD2P0DJD1 1756 aa1.67□□□□□ -2.14
PRKDC-208ENST00000536710 MED13Q9UHV7 2174 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 CEP350Q5VT06 3117 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 BLMP54132 1417 aaPredicted RBP1.66□□□□□ -2.14
PRKDC-208ENST00000536710 ABCC6O95255 1503 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 LY75O60449 1722 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 TAF1LQ8IZX4 1826 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 ANAPC1Q9H1A4 1944 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 IFNA14P01570 189 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 CRHP06850 196 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 GNG10P50151 68 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 TCTAP57738 103 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 FAM19A2Q8N3H0 131 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 OR4K15Q8NH41 348 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 PPTC7Q8NI37 304 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 MALSU1Q96EH3 234 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 OBSCN-AS1Q96MR7 158 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 ZNF714Q96N38 554 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 PRRT1Q99946 306 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 PBOV1Q9GZY1 135 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 POPDC3Q9HBV1 291 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 MYOM1P52179 1685 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 BTAF1O14981 1849 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 NFAT5O94916 1531 aa1.66□□□□□ -2.14
PRKDC-208ENST00000536710 MYOFQ9NZM1 2061 aa1.65□□□□□ -2.14
PRKDC-208ENST00000536710 CD163L1Q9NR16 1453 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 LOC110117498A0A087WWA1 95 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 MFSD11O43934 449 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 OGNP20774 298 aaKnown RBP1.65□□□□□ -2.15
PRKDC-208ENST00000536710 FAM74A1Q5RGS3 127 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 STX19Q8N4C7 294 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 OR5D14Q8NGL3 314 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 NEK7Q8TDX7 302 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 VIRMAQ69YN4 1812 aaKnown RBP1.65□□□□□ -2.15
PRKDC-208ENST00000536710 PKD1L3Q7Z443 1732 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 KIAA1551Q9HCM1 1747 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 TOGARAM1Q9Y4F4 1720 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 BCL9O00512 1426 aa1.65□□□□□ -2.15
PRKDC-208ENST00000536710 COL4A5P29400 1685 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 MAP2P11137 1827 aaKnown RBP1.64□□□□□ -2.15
PRKDC-208ENST00000536710 KIF20BQ96Q89 1820 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 ARHGEF10O15013 1369 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 CPDO75976 1380 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 DOT1LQ8TEK3 1739 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 INSL3P51460 131 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 TMBIM6P55061 237 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 KRTAP10-4P60372 401 aaPredicted RBP1.64□□□□□ -2.15
PRKDC-208ENST00000536710 TRIQKQ629K1 86 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 C2orf82Q6UX34 121 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 C4orf22Q6V702 233 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 BORCS5Q969J3 196 aa1.64□□□□□ -2.15
PRKDC-208ENST00000536710 CICQ96RK0 1608 aaPredicted RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms