RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TCF24Q7RTU0 167 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 TMEM17Q86X19 198 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 SNX29P2Q8IUI4 249 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 C8orf59Q8N0T1 100 aaPredicted RBP3.43□□□□□ -1.86
CLIP1-207ENST00000536634 GDPD1Q8N9F7 314 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 UBAC2Q8NBM4 344 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 BPIFB6Q8NFQ5 453 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 OR10W1Q8NGF6 305 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 OR4A4PQ8NGN8 299 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 GLYATL2Q8WU03 294 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 APH1BQ8WW43 257 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 ADTRPQ96IZ2 230 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 OR10C1Q96KK4 312 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 FAM210BQ96KR6 192 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 CCDC32Q9BV29 185 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 GGACTQ9BVM4 153 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 RNF167Q9H6Y7 350 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 GHRLQ9UBU3 117 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 SCP2D1Q9UJQ7 156 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 RPH3ALQ9UNE2 315 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 SSR3Q9UNL2 185 aa3.43□□□□□ -1.86
CLIP1-207ENST00000536634 IGKV1D-8A0A087WSZ0 117 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 METTL21EPA6NDL7 271 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 K7EIM0 57 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 ZNF861PO60384 105 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 YIF1AO95070 293 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 PPBPP02775 128 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 CTSGP08311 255 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 ZNF688P0C7X2 276 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 UBBP0CG47 229 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 SPART-AS1P0CW21 52 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 KRTAP10-1P60331 282 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 GABARAPL2P60520 117 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 RPL8P62917 257 aaKnown RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 PAFAH1B2P68402 229 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 WT1-ASQ06250 92 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 EIF4EBP1Q13541 118 aaPredicted RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 TMEM41BQ5BJD5 291 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 RNASE10Q5GAN6 216 aaKnown RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 ACTL10Q5JWF8 245 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 FAM222AQ5U5X8 452 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 UFSP1Q6NVU6 142 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 H1FOOQ8IZA3 346 aaPredicted RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 STOML3Q8TAV4 291 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 NARS2Q96I59 477 aaKnown RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 CMSS1Q9BQ75 279 aaKnown RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 PECRQ9BY49 303 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 SLIRPQ9GZT3 109 aaKnown RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 NXF2Q9GZY0 626 aaKnown RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 FGF20Q9NP95 211 aaPredicted RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 C21orf62Q9NYP8 219 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 XCL2Q9UBD3 114 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 KCNIP3Q9Y2W7 256 aa3.42□□□□□ -1.86
CLIP1-207ENST00000536634 RBM7Q9Y580 266 aaKnown RBP3.42□□□□□ -1.86
CLIP1-207ENST00000536634 TRAV14DV4A0A0A6YYC5 116 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 IGKV1D-13A0A0B4J2D9 117 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 FAM74A7A6NL05 159 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 IGKV1-13P0DP09 117 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 DTYMKP23919 212 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 DDTP30046 118 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 CAMLGP49069 296 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 WNT4P56705 351 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 RAB5BP61020 215 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 FAM74A3Q4VXF1 159 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 Q56UQ5 140 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 RBM48Q5RL73 367 aaKnown RBP3.41□□□□□ -1.86
CLIP1-207ENST00000536634 C1orf100Q5SVJ3 147 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 ZNF705AQ6ZN79 300 aaPredicted RBP3.41□□□□□ -1.86
CLIP1-207ENST00000536634 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
CLIP1-207ENST00000536634 OR2D3Q8NGH3 330 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 OR4S2Q8NH73 311 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 VSTM2AQ8TAG5 236 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 GINS4Q9BRT9 223 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 NIPSNAP3BQ9BS92 247 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 ZNF2Q9BSG1 426 aaPredicted RBP3.41□□□□□ -1.86
CLIP1-207ENST00000536634 VSIRQ9H7M9 311 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 SMPD3Q9NY59 655 aaPredicted RBP3.41□□□□□ -1.86
CLIP1-207ENST00000536634 RABAC1Q9UI14 185 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 LINC00588Q9Y4M8 146 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 HSPB11Q9Y547 144 aa3.41□□□□□ -1.86
CLIP1-207ENST00000536634 TRAV2A0A0B4J234 112 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 ZNF705FA8MVS1 300 aaPredicted RBP3.4□□□□□ -1.87
CLIP1-207ENST00000536634 H0Y8G0 127 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 K7EP13 123 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 ARPC5O15511 151 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 WBP4O75554 376 aaKnown RBP3.4□□□□□ -1.87
CLIP1-207ENST00000536634 SNAPC5O75971 98 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 IGHV3-48P01763 117 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 SERPINE2P07093 398 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 ZNF705DP0CH99 300 aaPredicted RBP3.4□□□□□ -1.87
CLIP1-207ENST00000536634 ZNF705BP0CI00 300 aaPredicted RBP3.4□□□□□ -1.87
CLIP1-207ENST00000536634 OR13C7P0DN81 318 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 RAB3BP20337 219 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 NFYAP23511 347 aaPredicted RBP3.4□□□□□ -1.87
CLIP1-207ENST00000536634 S100A11P31949 105 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 CEBPGP53567 150 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 TAS2R43P59537 309 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 PKIAP61925 76 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 TRAM1Q15629 374 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 NEDD8Q15843 81 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms