RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 KLK9Q2XQG4 91 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 ZC2HC1AQ96GY0 325 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 URB1-AS1Q96HZ7 61 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 KLK9Q9UKQ9 250 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 HAX1O00165 279 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 APOHP02749 345 aaPredicted RBP10.39□□□□□ -0.75
VPS33B-202ENST00000535906 CLEC3BP05452 202 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 PSG3Q16557 428 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 PRR31Q5SQ13 230 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 CLEC2AQ6UVW9 174 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 RABAC1Q9UI14 185 aa10.39□□□□□ -0.75
VPS33B-202ENST00000535906 NDUFS8O00217 210 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 BTF3P20290 206 aaKnown RBP10.38□□□□□ -0.75
VPS33B-202ENST00000535906 EBLN2Q6P2I7 272 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 NDFIP1Q9BT67 221 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 PSG8Q9UQ74 426 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 SMAD5-AS1Q9Y6J3 95 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 C2orf70A6NJV1 201 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 CHEK1O14757 476 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 SCGB2A1O75556 95 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 PRB1P04280 392 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 IGLC3P0DOY3 106 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 IGHV4-38-2P0DP08 117 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 CCDC140Q96MF4 163 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 AAMDCQ9H7C9 122 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 UQCR10Q9UDW1 63 aa10.38□□□□□ -0.75
VPS33B-202ENST00000535906 LOC102724200A0A096LPH7 203 aaPredicted RBP10.37□□□□□ -0.75
VPS33B-202ENST00000535906 RPLP1P05386 114 aaKnown RBP10.37□□□□□ -0.75
VPS33B-202ENST00000535906 RPL7P18124 248 aaKnown RBP10.37□□□□□ -0.75
VPS33B-202ENST00000535906 LCN12Q6JVE5 192 aa10.37□□□□□ -0.75
VPS33B-202ENST00000535906 KLHDC1Q8N7A1 406 aa10.37□□□□□ -0.75
VPS33B-202ENST00000535906 NRGNQ92686 78 aa10.37□□□□□ -0.75
VPS33B-202ENST00000535906 CHCHD1Q96BP2 118 aaKnown RBP10.37□□□□□ -0.75
VPS33B-202ENST00000535906 ZFAND3Q9H8U3 227 aa10.37□□□□□ -0.75
VPS33B-202ENST00000535906 LINC00527Q9UJ94 153 aa10.37□□□□□ -0.75
VPS33B-202ENST00000535906 MOB4Q9Y3A3 225 aa10.37□□□□□ -0.75
VPS33B-202ENST00000535906 CRIP1P50238 77 aa10.36□□□□□ -0.75
VPS33B-202ENST00000535906 CLEC19AQ6UXS0 136 aa10.36□□□□□ -0.75
VPS33B-202ENST00000535906 A0A1B0GUT8 65 aa10.36□□□□□ -0.75
VPS33B-202ENST00000535906 IGFL4Q6B9Z1 124 aa10.36□□□□□ -0.75
VPS33B-202ENST00000535906 ATOH7Q8N100 152 aa10.36□□□□□ -0.75
VPS33B-202ENST00000535906 C8orf49Q96NF6 230 aa10.36□□□□□ -0.75
VPS33B-202ENST00000535906 MEGF9Q9H1U4 602 aa10.36□□□□□ -0.75
VPS33B-202ENST00000535906 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
VPS33B-202ENST00000535906 M0QZ24 198 aa10.35□□□□□ -0.75
VPS33B-202ENST00000535906 PSG9Q00887 426 aa10.35□□□□□ -0.75
VPS33B-202ENST00000535906 SPOCK3Q9BQ16 436 aa10.35□□□□□ -0.75
VPS33B-202ENST00000535906 IGHG4P01861 327 aa10.35□□□□□ -0.75
VPS33B-202ENST00000535906 LINC00614P0C842 121 aa10.35□□□□□ -0.75
VPS33B-202ENST00000535906 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
VPS33B-202ENST00000535906 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
VPS33B-202ENST00000535906 ZNF462Q96JM2 2506 aa10.35□□□□□ -0.75
VPS33B-202ENST00000535906 TRAV9-2A0A087WT02 112 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 IGKV2-40A0A087WW87 121 aaPredicted RBP10.34□□□□□ -0.75
VPS33B-202ENST00000535906 IGHV1-24A0A0C4DH33 117 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 SERTM2A0A1B0GWG4 89 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 CLPSL1A2RUU4 121 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 CRXO43186 299 aaPredicted RBP10.34□□□□□ -0.75
VPS33B-202ENST00000535906 IGKV2D-40P01614 121 aaPredicted RBP10.34□□□□□ -0.75
VPS33B-202ENST00000535906 MSMBP08118 114 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 HLA-DMBP28068 263 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 CSN1S1P47710 185 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 RIGQ13278 110 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 MAJINQ3KP22 176 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 C19orf54Q5BKX5 351 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 CLEC5AQ9NY25 188 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 TRAV41A0A0B4J266 112 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 A0A1B0GW15 77 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 C20orf202A1L168 122 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 BUB3O43684 328 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 ARMS2P0C7Q2 107 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 Q6AWC8 147 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 EEF1AKMT3Q96AZ1 226 aa10.34□□□□□ -0.75
VPS33B-202ENST00000535906 BBC3Q96PG8 261 aaPredicted RBP10.34□□□□□ -0.75
VPS33B-202ENST00000535906 FBN2P35556 2912 aa10.33□□□□□ -0.76
VPS33B-202ENST00000535906 TRBV7-1A0A0A6YYK4 115 aa10.33□□□□□ -0.76
VPS33B-202ENST00000535906 BATFQ16520 125 aa10.33□□□□□ -0.76
VPS33B-202ENST00000535906 LY6EQ16553 131 aa10.33□□□□□ -0.76
VPS33B-202ENST00000535906 CYB5R2Q6BCY4 276 aa10.33□□□□□ -0.76
VPS33B-202ENST00000535906 Q6ZN92 141 aa10.33□□□□□ -0.76
VPS33B-202ENST00000535906 IGHV3-66A0A0C4DH42 116 aa10.33□□□□□ -0.76
VPS33B-202ENST00000535906 CT45A10P0DMU9 189 aa10.33□□□□□ -0.76
VPS33B-202ENST00000535906 ZNF25P17030 456 aaPredicted RBP10.33□□□□□ -0.76
VPS33B-202ENST00000535906 HNRNPA3P51991 378 aaKnown RBP10.33□□□□□ -0.76
VPS33B-202ENST00000535906 SPATA12Q7Z6I5 190 aa10.33□□□□□ -0.76
VPS33B-202ENST00000535906 IGHV3OR16-13A0A075B7E8 117 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 IGHV3-74A0A0B4J1X5 117 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 LEPROTL1O95214 131 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 AVPP01185 164 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 G0S2P27469 103 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 ARL6IP6Q8N6S5 226 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 HIF1ANQ9NWT6 349 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.32□□□□□ -0.762e-8■■■■□ 19.9
VPS33B-202ENST00000535906 H3BUX3 64 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 OR5AL1P0C617 328 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 CRIP2P52943 208 aaPredicted RBP10.32□□□□□ -0.76
VPS33B-202ENST00000535906 ATP5G2Q06055 141 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 COL5A1-AS1Q5SY13 56 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms