RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TRAV26-1A0A087WT03 109 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 UBE2L5PA0A1B0GUS4 154 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 LYRM1O43325 122 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 SLC25A5P05141 298 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 SNRPCP09234 159 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 HIST1H1EP10412 219 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 OPCMLQ14982 345 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 ATP6V1FQ16864 119 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 GFI1BQ5VTD9 330 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 MZT2BQ6NZ67 158 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 PATE2Q6UY27 113 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 RNASE8Q8TDE3 154 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 ZNF431Q8TF32 576 aaPredicted RBP9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 ZNF503Q96F45 646 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 C2orf50Q96LR7 162 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 MGST2Q99735 147 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 NDUFA13Q9P0J0 144 aa9.31□□□□□ -0.92
CLSTN3-205ENST00000535452 TRAV12-3A0A0B4J271 114 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 H3BTX0 84 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 CCSO14618 274 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 ZNF253O75346 499 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 MPDU1O75352 247 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 SULT1A1P50225 295 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 MIC13Q5XKP0 118 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 ZNRF2Q8NHG8 242 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 RXFP4Q8TDU9 374 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 MRPL53Q96EL3 112 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 C17orf77Q96MU5 243 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 ARPC5LQ9BPX5 153 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 Q9H8V8 135 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 GPN1Q9HCN4 374 aaPredicted RBP9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 SLC39A9Q9NUM3 307 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 PTTG2Q9NZH5 202 aa9.3□□□□□ -0.92
CLSTN3-205ENST00000535452 A0A0J9YY99 117 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 FAM240BA0A1B0GVZ2 78 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 EREGO14944 169 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 TCRBP04435 133 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 GPX1P07203 203 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 FGF7P21781 194 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 RPL29P47914 159 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 TMEM78Q5T7P6 136 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 TMEM37Q8WXS4 190 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 KRTAP17-1Q9BYP8 105 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 NUDT15Q9NV35 164 aa9.29□□□□□ -0.92
CLSTN3-205ENST00000535452 FAM24AA6NFZ4 105 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 H3BNG1 76 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 RGS13O14921 159 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 H2AFB2P0C5Z0 115 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 IGLC2P0DOY2 106 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 CSN1S1P47710 185 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 PDE6HQ13956 83 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 ZNF575Q86XF7 245 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 SLC25A31Q9H0C2 315 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 LYRM2Q9NU23 88 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 WDR83OSQ9Y284 106 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
CLSTN3-205ENST00000535452 A0A1W2PPQ1 181 aa9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 PLAC8L1A1L4L8 177 aa9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 C7orf71A4D174 169 aa9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 NPIPB6E9PJ23 425 aa9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 C17orf112F2Z3M2 114 aa9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 SLC17A3O00476 420 aa9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 BTF3P20290 206 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 EIF4E3Q8N5X7 224 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 BLNKQ8WV28 456 aa9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 CCDC32Q9BV29 185 aa9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 RBM38Q9H0Z9 239 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 DNAH6Q9C0G6 4158 aa9.27□□□□□ -0.93
CLSTN3-205ENST00000535452 HECTD4Q9Y4D8 3996 aa9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 TRGV1A0A0A0MS02 117 aa9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 H3BQ15 152 aa9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 PRB4P10163 310 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 BTCP35070 178 aa9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 TNP2Q05952 138 aa9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 ARL16Q0P5N6 197 aa9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 DAZ2Q13117 558 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 SLAQ13239 276 aa9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 ENKURQ8TC29 256 aa9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 PARD6GQ9BYG4 376 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 TMEM14CQ9P0S9 112 aa9.26□□□□□ -0.93
CLSTN3-205ENST00000535452 TRBV19A0A075B6N1 114 aa9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 TRAV5A0A0B4J249 113 aa9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 PRAC2D3DTV9 90 aa9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 CT45A10P0DMU9 189 aa9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 RNASE4P34096 147 aaKnown RBP9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 TMEM252Q8N6L7 170 aa9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 PCNPQ8WW12 178 aaKnown RBP9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 SAT2Q96F10 170 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 SEC22CQ9BRL7 303 aa9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 ZNF586Q9NXT0 402 aa9.25□□□□□ -0.93
CLSTN3-205ENST00000535452 TRAV9-2A0A087WT02 112 aa9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 CYCSP99999 105 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 RAB32Q13637 225 aa9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 VWC2Q2TAL6 325 aa9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 UPK3BQ9BT76 320 aa9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 Q9H3A6 140 aa9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 TMPRSS5Q9H3S3 457 aa9.24□□□□□ -0.93
CLSTN3-205ENST00000535452 GSN-AS1Q9NRJ2 163 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms