RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 AMBPP02760 352 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 DEFB130BP0DP73 79 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 DEFB130AP0DP74 79 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 RPL29P47914 159 aaKnown RBP6.78□□□□□ -1.32
SSBP3-215ENST00000533946 B2MP61769 119 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 Q5BKY6 102 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 LRRC20Q8TCA0 184 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 BLNKQ8WV28 456 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 LINC01587Q99440 93 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 MARVELD1Q9BSK0 173 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 TMEM208Q9BTX3 173 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 NPCDR1Q9BY65 106 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 TRAV12-3A0A0B4J271 114 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 SMIM9A6NGZ8 99 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 RTL8CO15255 209 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 INSP01308 110 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 S100A11P31949 105 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 CD300CQ08708 224 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 LINC00299Q6ZSB3 139 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 PPP1R1CQ8WVI7 109 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 VGLL1Q99990 258 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 AGPAT4-IT1Q9H0P7 198 aa6.77□□□□□ -1.33
SSBP3-215ENST00000533946 TRBV19A0A075B6N1 114 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 IGKV2-40A0A087WW87 121 aaPredicted RBP6.76□□□□□ -1.33
SSBP3-215ENST00000533946 IGKV2D-40P01614 121 aaPredicted RBP6.76□□□□□ -1.33
SSBP3-215ENST00000533946 OR10J4P0C629 311 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 DAD1P61803 113 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 BTN1A1Q13410 526 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 LCN15Q6UWW0 184 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 BPIFA4PQ86YQ2 179 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 FXYD5Q96DB9 178 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 PHYHIPLQ96FC7 376 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 NMES1Q9C002 83 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 NOP10Q9NPE3 64 aaKnown RBP6.76□□□□□ -1.33
SSBP3-215ENST00000533946 TP53TG3Q9ULZ0 132 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 ALG5Q9Y673 324 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 HSPG2P98160 4391 aa6.76□□□□□ -1.33
SSBP3-215ENST00000533946 A0A1B0GVY2 172 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 NPIPB6E9PJ23 425 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 MPC2O95563 127 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 PVALBP20472 110 aaPredicted RBP6.75□□□□□ -1.33
SSBP3-215ENST00000533946 HOXA5P20719 270 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 PXDC1Q5TGL8 231 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 FAM122CQ6P4D5 195 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 Q6ZRG5 221 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 STX12Q86Y82 276 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 POM121L12Q8N7R1 296 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 RNASE8Q8TDE3 154 aaKnown RBP6.75□□□□□ -1.33
SSBP3-215ENST00000533946 CHAC2Q8WUX2 184 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 NDUFAF3Q9BU61 184 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 WDR61Q9GZS3 305 aaKnown RBP6.75□□□□□ -1.33
SSBP3-215ENST00000533946 MBD2Q9UBB5 411 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 APOBP04114 4563 aaKnown RBP6.75□□□□□ -1.33
SSBP3-215ENST00000533946 RYR1P21817 5038 aa6.75□□□□□ -1.33
SSBP3-215ENST00000533946 E5RGE8 158 aa6.74□□□□□ -1.33
SSBP3-215ENST00000533946 SSNA1O43805 119 aa6.74□□□□□ -1.33
SSBP3-215ENST00000533946 CDKN1BP46527 198 aa6.74□□□□□ -1.33
SSBP3-215ENST00000533946 ICAM4Q14773 271 aa6.74□□□□□ -1.33
SSBP3-215ENST00000533946 Q8TAT8 98 aa6.74□□□□□ -1.33
SSBP3-215ENST00000533946 FAM19A4Q96LR4 140 aa6.74□□□□□ -1.33
SSBP3-215ENST00000533946 SLC50A1Q9BRV3 221 aa6.74□□□□□ -1.33
SSBP3-215ENST00000533946 TMEM189A5PLL7 270 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 HMGB3O15347 200 aaKnown RBP6.73□□□□□ -1.33
SSBP3-215ENST00000533946 ZNF324O75467 553 aaPredicted RBP6.73□□□□□ -1.33
SSBP3-215ENST00000533946 HIST1H1EP10412 219 aaKnown RBP6.73□□□□□ -1.33
SSBP3-215ENST00000533946 CXCL2P19875 107 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 RNASE4P34096 147 aaKnown RBP6.73□□□□□ -1.33
SSBP3-215ENST00000533946 TAS2R60P59551 318 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 HBG1P69891 147 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 HBG2P69892 147 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 OXA1LQ15070 435 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 ATP6V1FQ16864 119 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 SAMD13Q5VXD3 122 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 Q6ZR54 194 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 Q6ZTI0 123 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 OR1L4Q8NGR5 311 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 PPP1R14DQ9NXH3 145 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 TMEM14CQ9P0S9 112 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 KLF12Q9Y4X4 402 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 HSPB11Q9Y547 144 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 MUC4Q99102 2169 aa6.73□□□□□ -1.33
SSBP3-215ENST00000533946 GAGE12BA1L429 117 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 F5H768 121 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 PRAF2O60831 178 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 GAGE7O76087 117 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 GAGE12FP0CL80 117 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 GAGE12GP0CL81 117 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 GAGE12IP0CL82 117 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 TSPOP30536 169 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 TCTAP57738 103 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 RAB2AP61019 212 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 RAB31Q13636 194 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 FFAR4Q5NUL3 377 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 ZFAND2AQ8N6M9 145 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 C11orf72Q8NBR9 251 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 OR10J6PQ8NGY7 276 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 RNF141Q8WVD5 230 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 PFDN5Q99471 154 aa6.72□□□□□ -1.33
SSBP3-215ENST00000533946 GSN-AS1Q9NRJ2 163 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms