RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 DIRC1Q969H9 104 aa0.24□□□□□ -2.37
BRCA2-205ENST00000533776 BORCS5Q969J3 196 aa0.24□□□□□ -2.37
BRCA2-205ENST00000533776 BORCS8Q96FH0 119 aa0.24□□□□□ -2.37
BRCA2-205ENST00000533776 MACF1Q9UPN3 7388 aaKnown RBP0.24□□□□□ -2.37
BRCA2-205ENST00000533776 TCOF1Q13428 1488 aaKnown RBP0.23□□□□□ -2.37
BRCA2-205ENST00000533776 TRAPPC8Q9Y2L5 1435 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 FSIP2Q5CZC0 6907 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 hDV103S1A0JD37 113 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 E5RI56 91 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 PPP5D1E7EU14 171 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 GPR31O00270 319 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 SERPINB1P30740 379 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 MYL5Q02045 173 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 MIR22HGQ0VDD5 57 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 RTL8BQ17RB0 113 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 FAM74A1Q5RGS3 127 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 C3orf33Q6P1S2 294 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 HAGHLQ6PII5 290 aaPredicted RBP0.23□□□□□ -2.37
BRCA2-205ENST00000533776 C2orf82Q6UX34 121 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 HRCT1Q6UXD1 115 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 PLPP5Q8NEB5 264 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 OR2H1Q9GZK4 316 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 NIT2Q9NQR4 276 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 BIN3Q9NQY0 253 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 WDR97A6NE52 1622 aa0.23□□□□□ -2.37
BRCA2-205ENST00000533776 FER1L6Q2WGJ9 1857 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 FAM135BQ49AJ0 1406 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 YTHDC2Q9H6S0 1430 aaKnown RBP0.22□□□□□ -2.37
BRCA2-205ENST00000533776 KIAA1107Q9UPP5 1409 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 KIAA1549LQ6ZVL6 1849 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 ASCC3Q8N3C0 2202 aaKnown RBP0.22□□□□□ -2.37
BRCA2-205ENST00000533776 ASH1LQ9NR48 2969 aaKnown RBP0.22□□□□□ -2.37
BRCA2-205ENST00000533776 MUC4Q99102 2169 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 ZGRF1Q86YA3 2104 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 A0A0D9SG42 100 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 MAP1LC3B2A6NCE7 125 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 NCR3O14931 201 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 IFNA14P01570 189 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 IGHV3-33P01772 117 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 APOA2P02652 100 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 KRTAP2-3P0C7H8 128 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 RPL35P42766 123 aaKnown RBP0.22□□□□□ -2.37
BRCA2-205ENST00000533776 DCUN1D2Q6PH85 259 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 STX19Q8N4C7 294 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 OR10AG1Q8NH19 301 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 OR4K15Q8NH41 348 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 RMND5BQ96G75 393 aaPredicted RBP0.22□□□□□ -2.37
BRCA2-205ENST00000533776 LIMD2Q9BT23 127 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 PBDC1Q9BVG4 233 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 KRTAP2-4Q9BYR9 128 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 KRTAP2-1Q9BYU5 128 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 MAP1LC3BQ9GZQ8 125 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 PCBD2Q9H0N5 130 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 TMEM14CQ9P0S9 112 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 NAT8BQ9UHF3 227 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 NUBP2Q9Y5Y2 271 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 TANC2Q9HCD6 1990 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 ZNF462Q96JM2 2506 aa0.22□□□□□ -2.37
BRCA2-205ENST00000533776 XIRP1Q702N8 1843 aaKnown RBP0.22□□□□□ -2.37
BRCA2-205ENST00000533776 A0A0J9YY99 117 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 OR2T8A6NH00 312 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 F8W1H4 67 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 JMJD7-PLA2G4BH0Y9G9 81 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 GABARAPH6UMI1 98 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 FABP1P07148 127 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 CD14P08571 375 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 RPL7P18124 248 aaKnown RBP0.21□□□□□ -2.38
BRCA2-205ENST00000533776 RPS3P23396 243 aaKnown RBP eCLIP0.21□□□□□ -2.38
BRCA2-205ENST00000533776 TCTAP57738 103 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 SPATA8Q6RVD6 105 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 ANGPTL5Q86XS5 388 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 LRRC18Q8N456 261 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 FAM216BQ8N7L0 139 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 THEM6Q8WUY1 208 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 ZNF714Q96N38 554 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 C10orf95Q9H7T3 257 aa0.21□□□□□ -2.38
BRCA2-205ENST00000533776 H3BRM9 83 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 KPNA4O00629 521 aaPredicted RBP0.2□□□□□ -2.38
BRCA2-205ENST00000533776 PPYP01298 95 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 IFNA4P05014 189 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 PDE6GP18545 87 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 S100A11P31949 105 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 POLR2HP52434 150 aaKnown RBP0.2□□□□□ -2.38
BRCA2-205ENST00000533776 FOXA3P55318 350 aaPredicted RBP0.2□□□□□ -2.38
BRCA2-205ENST00000533776 Q5XG85 94 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 TRIQKQ629K1 86 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 LINC00575Q6W349 94 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 GKN2Q86XP6 184 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 STX12Q86Y82 276 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 FAM24BQ8N5W8 94 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 OR10AC1Q8NH08 325 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 WFDC10AQ9H1F0 79 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 TMEM138Q9NPI0 162 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 TNFSF18Q9UNG2 199 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 MED31Q9Y3C7 131 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 MEGF8Q7Z7M0 2845 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 ANK1P16157 1881 aa0.2□□□□□ -2.38
BRCA2-205ENST00000533776 MED12Q93074 2177 aa0.19□□□□□ -2.38
BRCA2-205ENST00000533776 DLC1Q96QB1 1528 aa0.19□□□□□ -2.38
BRCA2-205ENST00000533776 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms