RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 SPANXA1Q9NS26 97 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 C11orf68Q9H3H3 251 aaKnown RBP9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 DENND4CQ5VZ89 1909 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 NDUFS7O75251 213 aa9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 SRSF1Q07955 248 aaKnown RBP eCLIP9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 RSPO1Q2MKA7 263 aaPredicted RBP9.05□□□□□ -0.96
AMBRA1-211ENST00000533727 POLEQ07864 2286 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 TRAV8-1A0A0A6YYK1 113 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 A0A1W2PPI3 338 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 SSBP2P81877 361 aaPredicted RBP9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 GAGE1Q13065 139 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 ZNF524Q96C55 264 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 ZMAT4Q9H898 229 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 TRBV7-9A0A0J9YWB2 115 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 IGKV1-16P04430 117 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 PLNP26678 52 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 MST1LQ2TV78 715 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 TRAV3A0A0B4J244 114 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 SYS1-DBNDD2H3BUS1 97 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 RPL35AP18077 110 aaKnown RBP9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 Q8NFD4 153 aa9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 DLX4Q92988 240 aaPredicted RBP9.04□□□□□ -0.96
AMBRA1-211ENST00000533727 TRAV12-3A0A0B4J271 114 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 C15orf65H3BRN8 121 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 RCHY1Q96PM5 261 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 ACACBO00763 2458 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 RPL15P61313 204 aaKnown RBP9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 ORMDL2Q53FV1 153 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 TMEM14BQ9NUH8 114 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 PMS2P5A8MQ11 134 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 LHBP01229 141 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 PYYP10082 97 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 FAM120AOSQ5T036 256 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 CFAP161Q6P656 301 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 LY96Q9Y6Y9 160 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 C9JQL5 133 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 FOXE3Q13461 319 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 ATXN8Q156A1 80 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 PSG3Q16557 428 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 FAM90A2PQ658T7 463 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 ADAMTSL5Q6ZMM2 481 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 NDUFA4L2Q9NRX3 87 aa9.03□□□□□ -0.96
AMBRA1-211ENST00000533727 DOCK9Q9BZ29 2069 aa9.02□□□□□ -0.96
AMBRA1-211ENST00000533727 TRAV2A0A0B4J234 112 aa9.02□□□□□ -0.96
AMBRA1-211ENST00000533727 C9orf66Q5T8R8 295 aa9.02□□□□□ -0.96
AMBRA1-211ENST00000533727 PTPRQQ9UMZ3 2332 aa9.02□□□□□ -0.96
AMBRA1-211ENST00000533727 IGKV3OR2-268A0A0C4DH90 116 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 LYL1P12980 280 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 KRTAP27-1Q3LI81 207 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 IL17RELQ6ZVW7 336 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 SCRT1Q9BWW7 348 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 CHTOPQ9Y3Y2 248 aaKnown RBP9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 CUL9Q8IWT3 2517 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 PCNX1Q96RV3 2341 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 RPL36AP83881 106 aaKnown RBP9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 RPL36ALQ969Q0 106 aaKnown RBP9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 ANAPC10Q9UM13 185 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 OBSL1O75147 1896 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 CTSZQ9UBR2 303 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 ADAMTS9Q9P2N4 1935 aa9.02□□□□□ -0.97
AMBRA1-211ENST00000533727 CNTFRP26992 372 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 DEFB131AP59861 70 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 POU2AF1Q16633 256 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 RNF182Q8N6D2 247 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 GTF3C1Q12789 2109 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 FCN3O75636 299 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 RNF144BQ7Z419 303 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 CITED1Q99966 193 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 SRRM4A7MD48 611 aaKnown RBP9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 IGHV4-59P01825 116 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 A0A087WX48 190 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 Q0VG73 95 aa9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 C1orf147Q96MC9 270 aaPredicted RBP9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 RSPO3Q9BXY4 272 aaPredicted RBP9.01□□□□□ -0.97
AMBRA1-211ENST00000533727 IGKV1-6A0A0C4DH72 117 aa9□□□□□ -0.97
AMBRA1-211ENST00000533727 TCTEX1D4Q5JR98 221 aa9□□□□□ -0.97
AMBRA1-211ENST00000533727 RBMY1BA6NDE4 496 aaKnown RBP9□□□□□ -0.97
AMBRA1-211ENST00000533727 RBMY1EA6NEQ0 496 aaKnown RBP9□□□□□ -0.97
AMBRA1-211ENST00000533727 RBMY1DP0C7P1 496 aaKnown RBP9□□□□□ -0.97
AMBRA1-211ENST00000533727 RBMY1A1P0DJD3 496 aaKnown RBP9□□□□□ -0.97
AMBRA1-211ENST00000533727 RBMY1CP0DJD4 496 aa9□□□□□ -0.97
AMBRA1-211ENST00000533727 PHF3Q92576 2039 aaKnown RBP9□□□□□ -0.97
AMBRA1-211ENST00000533727 CENPVL3A0A0U1RRI6 287 aa9□□□□□ -0.97
AMBRA1-211ENST00000533727 TMEM89A2RUT3 159 aa9□□□□□ -0.97
AMBRA1-211ENST00000533727 C15orf62A8K5M9 175 aa9□□□□□ -0.97
AMBRA1-211ENST00000533727 PFN1P07737 140 aaKnown RBP9□□□□□ -0.97
AMBRA1-211ENST00000533727 LGALS1P09382 135 aaKnown RBP9□□□□□ -0.97
AMBRA1-211ENST00000533727 NDPQ00604 133 aa9□□□□□ -0.97
AMBRA1-211ENST00000533727 DUX4L9Q6RFH8 374 aaPredicted RBP9□□□□□ -0.97
AMBRA1-211ENST00000533727 Q6ZSR3 168 aa9□□□□□ -0.97
AMBRA1-211ENST00000533727 MGST2Q99735 147 aa9□□□□□ -0.97
AMBRA1-211ENST00000533727 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
AMBRA1-211ENST00000533727 TRGV1A0A0A0MS02 117 aa8.99□□□□□ -0.97
AMBRA1-211ENST00000533727 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.99□□□□□ -0.97
AMBRA1-211ENST00000533727 G3V318 75 aa8.99□□□□□ -0.97
AMBRA1-211ENST00000533727 IGLC2P0DOY2 106 aa8.99□□□□□ -0.97
AMBRA1-211ENST00000533727 IGLC3P0DOY3 106 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms