RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 PSG9Q00887 426 aa10.74□□□□□ -0.69
TRIM3-212ENST00000533064 DEFB114Q30KQ6 69 aa10.74□□□□□ -0.69
TRIM3-212ENST00000533064 TMEM88Q6PEY1 159 aa10.74□□□□□ -0.69
TRIM3-212ENST00000533064 DERL1Q9BUN8 251 aa10.74□□□□□ -0.69
TRIM3-212ENST00000533064 SMCO4Q9NRQ5 59 aa10.74□□□□□ -0.69
TRIM3-212ENST00000533064 A0A087WWC5 75 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 H3BTX0 84 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 C9orf66Q5T8R8 295 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 SAMD13Q5VXD3 122 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 CBLN2Q8IUK8 224 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.73□□□□□ -0.69
TRIM3-212ENST00000533064 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 AAMDCQ9H7C9 122 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 TRAV25A0A0B4J276 109 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 ZNF253O75346 499 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 AKR1C3P42330 323 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 RANP62826 216 aaKnown RBP10.73□□□□□ -0.69
TRIM3-212ENST00000533064 RPL23P62829 140 aaKnown RBP10.73□□□□□ -0.69
TRIM3-212ENST00000533064 CD300EQ496F6 205 aaPredicted RBP10.73□□□□□ -0.69
TRIM3-212ENST00000533064 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 LYPD1Q8N2G4 141 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 GBGT1Q8N5D6 347 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 C16orf92Q96LL3 132 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 C17orf77Q96MU5 243 aa10.73□□□□□ -0.69
TRIM3-212ENST00000533064 RPL35P42766 123 aaKnown RBP10.72□□□□□ -0.69
TRIM3-212ENST00000533064 ADIRFQ15847 76 aa10.72□□□□□ -0.69
TRIM3-212ENST00000533064 TMEM61Q8N0U2 210 aa10.72□□□□□ -0.69
TRIM3-212ENST00000533064 WFDC9Q8NEX5 89 aa10.72□□□□□ -0.69
TRIM3-212ENST00000533064 OR2K2Q8NGT1 345 aa10.72□□□□□ -0.69
TRIM3-212ENST00000533064 C2CD4CQ8TF44 421 aa10.72□□□□□ -0.69
TRIM3-212ENST00000533064 MS4A6AQ9H2W1 248 aa10.72□□□□□ -0.69
TRIM3-212ENST00000533064 TUBA4BQ9H853 241 aa10.72□□□□□ -0.69
TRIM3-212ENST00000533064 ANK2Q01484 3957 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 C9JCJ5 164 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 TSPAN4O14817 238 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 IGLV1-51P01701 117 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 ID1P41134 155 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 LCN12Q6JVE5 192 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 HIST1H2BAQ96A08 127 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 GPR61Q9BZJ8 451 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 Q9H3A6 140 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 OTORQ9NRC9 128 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 CLEC5AQ9NY25 188 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 LY96Q9Y6Y9 160 aa10.71□□□□□ -0.69
TRIM3-212ENST00000533064 AGRNO00468 2067 aa10.71□□□□□ -0.7
TRIM3-212ENST00000533064 TRBV20OR9-2A0A075B6H5 130 aa10.7□□□□□ -0.7
TRIM3-212ENST00000533064 PGPA6NDG6 321 aa10.7□□□□□ -0.7
TRIM3-212ENST00000533064 SLC17A3O00476 420 aa10.7□□□□□ -0.7
TRIM3-212ENST00000533064 ISLRO14498 428 aa10.7□□□□□ -0.7
TRIM3-212ENST00000533064 TFPI2P48307 235 aa10.7□□□□□ -0.7
TRIM3-212ENST00000533064 LINC01551Q86U37 167 aa10.7□□□□□ -0.7
TRIM3-212ENST00000533064 SPAG8Q99932 426 aaPredicted RBP10.7□□□□□ -0.7
TRIM3-212ENST00000533064 ZNF331Q9NQX6 463 aaPredicted RBP10.7□□□□□ -0.7
TRIM3-212ENST00000533064 EPDR1Q9UM22 224 aa10.7□□□□□ -0.7
TRIM3-212ENST00000533064 PKD1L1Q8TDX9 2849 aa10.7□□□□□ -0.7
TRIM3-212ENST00000533064 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 PEX7O00628 323 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 SLC25A5P05141 298 aaKnown RBP10.69□□□□□ -0.7
TRIM3-212ENST00000533064 SNRPD3P62318 126 aaKnown RBP10.69□□□□□ -0.7
TRIM3-212ENST00000533064 C5orf17Q8NAS9 161 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 CMTM2Q8TAZ6 248 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 TMEM242Q9NWH2 141 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 CXorf65A6NEN9 183 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 OR4C46A6NHA9 309 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 CNN1P51911 297 aaKnown RBP10.69□□□□□ -0.7
TRIM3-212ENST00000533064 KRTAP21-3Q3LHN1 58 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 PRR31Q5SQ13 230 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 EXOC3-AS1Q8N2X6 119 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 DCANP1Q8TF63 244 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 CTDSP1Q9GZU7 261 aa10.69□□□□□ -0.7
TRIM3-212ENST00000533064 K7EQG2 157 aa10.68□□□□□ -0.7
TRIM3-212ENST00000533064 MT-ND4LP03901 98 aa10.68□□□□□ -0.7
TRIM3-212ENST00000533064 CSN1S1P47710 185 aa10.68□□□□□ -0.7
TRIM3-212ENST00000533064 GNG4P50150 75 aa10.68□□□□□ -0.7
TRIM3-212ENST00000533064 TAS2R60P59551 318 aa10.68□□□□□ -0.7
TRIM3-212ENST00000533064 RNF212Q495C1 297 aa10.68□□□□□ -0.7
TRIM3-212ENST00000533064 C15orf54Q8N8G6 183 aa10.68□□□□□ -0.7
TRIM3-212ENST00000533064 IZUMO1RA6ND01 250 aa10.67□□□□□ -0.7
TRIM3-212ENST00000533064 SOCS3O14543 225 aa10.67□□□□□ -0.7
TRIM3-212ENST00000533064 IGLL1P15814 213 aa10.67□□□□□ -0.7
TRIM3-212ENST00000533064 CENPWQ5EE01 88 aa10.67□□□□□ -0.7
TRIM3-212ENST00000533064 SPATA3Q8NHX4 192 aa10.67□□□□□ -0.7
TRIM3-212ENST00000533064 OCC1Q8TAD7 63 aa10.67□□□□□ -0.7
TRIM3-212ENST00000533064 ISOC2Q96AB3 205 aa10.67□□□□□ -0.7
TRIM3-212ENST00000533064 ANAPC16Q96DE5 110 aa10.67□□□□□ -0.7
TRIM3-212ENST00000533064 ATG101Q9BSB4 218 aa10.67□□□□□ -0.7
TRIM3-212ENST00000533064 ZMAT5Q9UDW3 170 aaKnown RBP10.67□□□□□ -0.7
TRIM3-212ENST00000533064 PGPEP1LA6NFU8 196 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 S100A9P06702 114 aaKnown RBP10.66□□□□□ -0.7
TRIM3-212ENST00000533064 GNG5P63218 68 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 PSG3Q16557 428 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 IGFL4Q6B9Z1 124 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 RNF182Q8N6D2 247 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 IGF2BP2-AS1Q96M15 143 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 RPH3ALQ9UNE2 315 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 COLCA2A8K830 154 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 TCRAP04437 139 aa10.66□□□□□ -0.7
TRIM3-212ENST00000533064 ZNF688P0C7X2 276 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms