RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 IGHV3-73A0A0B4J1V6 119 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 NCR2O95944 276 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 MLANAQ16655 118 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 LRRC75A-AS1Q8N1F1 130 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 RNF138Q8WVD3 245 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 XCL2Q9UBD3 114 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 CTSZQ9UBR2 303 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 IGFL4Q6B9Z1 124 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 SPCS1Q9Y6A9 102 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 TSPAN13O95857 204 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 SLC25A2Q9BXI2 301 aa9.04□□□□□ -0.96
PTPRK-221ENST00000532331 CUL9Q8IWT3 2517 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 ZNF815PA8K554 130 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 CCL24O00175 119 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 PDE6HQ13956 83 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 C9orf66Q5T8R8 295 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 C5orf30Q96GV9 206 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 NDUFA4O00483 81 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 GSN-AS1Q9NRJ2 163 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 LRRK1Q38SD2 2015 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 A0A1B0GV90 55 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 F5H768 121 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 TMEM86BQ8N661 226 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 MORN3Q6PF18 240 aaPredicted RBP9.03□□□□□ -0.96
PTPRK-221ENST00000532331 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 VCYO14598 125 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 CXCL1P09341 107 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 TMEM14BQ9NUH8 114 aa9.03□□□□□ -0.96
PTPRK-221ENST00000532331 H3BUA1 57 aa9.02□□□□□ -0.96
PTPRK-221ENST00000532331 CD300EQ496F6 205 aaPredicted RBP9.02□□□□□ -0.96
PTPRK-221ENST00000532331 MRPL27Q9P0M9 148 aaKnown RBP9.02□□□□□ -0.96
PTPRK-221ENST00000532331 NUP35Q8NFH5 326 aa9.02□□□□□ -0.97
PTPRK-221ENST00000532331 NHP2Q9NX24 153 aaKnown RBP9.02□□□□□ -0.97
PTPRK-221ENST00000532331 TYMSP04818 313 aa9.02□□□□□ -0.97
PTPRK-221ENST00000532331 GTF3C1Q12789 2109 aa9.02□□□□□ -0.97
PTPRK-221ENST00000532331 TRAV8-1A0A0A6YYK1 113 aa9.02□□□□□ -0.97
PTPRK-221ENST00000532331 YPEL3P61236 119 aaPredicted RBP9.02□□□□□ -0.97
PTPRK-221ENST00000532331 RSPO1Q2MKA7 263 aaPredicted RBP9.02□□□□□ -0.97
PTPRK-221ENST00000532331 COL4A3Q01955 1670 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 CENPVL3A0A0U1RRI6 287 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 MMP23AO75900 390 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 CKS1BP61024 79 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 OR5A1Q8NGJ0 315 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 NDUFA4L2Q9NRX3 87 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 WNK2Q9Y3S1 2297 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 LINC00158P58513 81 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 YLPM1P49750 1951 aaKnown RBP9.01□□□□□ -0.97
PTPRK-221ENST00000532331 C19orf84I3L1E1 186 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 PAX2Q02962 417 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 Q86TA4 180 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 DOPEY2Q9Y3R5 2298 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 TEX43Q6ZNM6 134 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 C14orf178Q8N769 122 aaPredicted RBP9.01□□□□□ -0.97
PTPRK-221ENST00000532331 KIAA2026Q5HYC2 2103 aa9.01□□□□□ -0.97
PTPRK-221ENST00000532331 IGHV3-64A0A075B6Q5 118 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 H3BUT2 72 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9□□□□□ -0.97
PTPRK-221ENST00000532331 COLCA2A8K830 154 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 C15orf65H3BRN8 121 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 UBE2CO00762 179 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 SEC11AP67812 179 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 C10orf126Q8N4M7 172 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 OR11H6Q8NGC7 330 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 HIST1H2BLQ99880 126 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 EREGO14944 169 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 MS4A6AQ9H2W1 248 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 ANAPC10Q9UM13 185 aa9□□□□□ -0.97
PTPRK-221ENST00000532331 LSM4Q9Y4Z0 139 aaKnown RBP9□□□□□ -0.97
PTPRK-221ENST00000532331 LINC00587B1AMM8 73 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 ERCC8Q13216 396 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 C1orf147Q96MC9 270 aaPredicted RBP8.99□□□□□ -0.97
PTPRK-221ENST00000532331 CSTL1Q9H114 145 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 OTOGLQ3ZCN5 2332 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 A0A0U1RRA0 63 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 LOXL1Q08397 574 aaPredicted RBP8.99□□□□□ -0.97
PTPRK-221ENST00000532331 DIAPH2-AS1Q14236 149 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 FOXE3Q13461 319 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 C8orf86Q6ZUL3 223 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 TMEM238C9JI98 176 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 LGALS1P09382 135 aaKnown RBP8.99□□□□□ -0.97
PTPRK-221ENST00000532331 PLA2G2AP14555 144 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 C21orf62-AS1Q17RA5 79 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 C8orf31Q8N9H6 132 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 ORAOV1Q8WV07 137 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 NDUFAF3Q9BU61 184 aa8.99□□□□□ -0.97
PTPRK-221ENST00000532331 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.98□□□□□ -0.974e-9■■■□□ 18
PTPRK-221ENST00000532331 S100A7L2Q5SY68 101 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 HIST3H2BBQ8N257 126 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 RASL10AQ92737 203 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 SPRNQ5BIV9 151 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 LOC105371267A0A1B0GV96 52 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 WISP2O76076 250 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 GFRA4Q9GZZ7 299 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 SPINK13Q1W4C9 94 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 TMEM95Q3KNT9 176 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 C1orf194Q5T5A4 169 aa8.98□□□□□ -0.97
PTPRK-221ENST00000532331 TMEM75Q8N9X5 138 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms