RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 LINC00311Q8N616 119 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 TCTEX1D1Q8N7M0 179 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 OR5AK2Q8NH90 309 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 TMEM254Q8TBM7 123 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 LINC00167Q96N53 147 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 SDF2Q99470 211 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 PSMG3Q9BT73 122 aaPredicted RBP2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 SNRNP25Q9BV90 132 aaKnown RBP2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 RERGLQ9H628 205 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 MPC1Q9Y5U8 109 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 NYNRINQ9P2P1 1898 aaKnown RBP2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 PLXND1Q9Y4D7 1925 aa2.34□□□□□ -2.04
AC055878.1-201ENST00000531858 THADAQ6YHU6 1953 aa2.34□□□□□ -2.04
AC055878.1-201ENST00000531858 TRAV12-1A0A0B4J245 112 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 FAM236AA0A1B0GUQ0 79 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 FAM236BA0A1B0GV22 79 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 FNDC10F2Z333 226 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 CORTO00230 105 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 PYYP10082 97 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 SLC25A4P12235 298 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 CIRBPQ14011 172 aaKnown RBP2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 CCSMST1Q4G0I0 132 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 ARPINQ7Z6K5 226 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 OR5AS1Q8N127 324 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 C9orf163Q8N9P6 203 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 COPS9Q8WXC6 57 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 CLEC2BQ92478 149 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 PSMF1Q92530 271 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 Q96M85 177 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 SPANXDQ9BXN6 97 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 RGS12O14924 1447 aa2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 NUP210Q8TEM1 1887 aaPredicted RBP2.33□□□□□ -2.04
AC055878.1-201ENST00000531858 WDR90Q96KV7 1748 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 TRAV3A0A0B4J244 114 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 TRAV1-1A0A0B4J248 108 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 BBIP1A8MTZ0 92 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 E7EQL1 145 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 IGLV3-19P01714 112 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 CRPP02741 224 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 ASAH2BP0C7U1 165 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 RPL26P61254 145 aaKnown RBP2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 ELOBQ15370 118 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 C2orf82Q6UX34 121 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 RPL26L1Q9UNX3 145 aaKnown RBP2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 OBSL1O75147 1896 aa2.32□□□□□ -2.04
AC055878.1-201ENST00000531858 SLX4Q8IY92 1834 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 SBF1O95248 1867 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 PCM1Q15154 2024 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 IGKV2D-26A0A0A0MRZ7 120 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 A0A0G2JMM0 328 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 A0A1W2PPB8 328 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 KIR3DP1A8MWS1 328 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 M0R2P5 195 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 CD3DP04234 171 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 CKS2P33552 79 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 SSR2P43308 183 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 PCBD1P61457 104 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 ZNF846Q147U1 533 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 C1orf134Q5TEV5 83 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 Q8N2B8 174 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 SFT2D1Q8WV19 159 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 C4orf3Q8WVX3 66 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 PP6455Q8WZ26 134 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 PPP3R2Q96LZ3 170 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 NABP2Q9BQ15 211 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 NALCNQ8IZF0 1738 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 NUP98P52948 1817 aa2.31□□□□□ -2.04
AC055878.1-201ENST00000531858 ZNF638Q14966 1978 aaKnown RBP2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 DOCK4Q8N1I0 1966 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 A0A1W2PNN7 141 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 IFITM5A6NNB3 132 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 HYPMO75409 117 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 ERC2-IT1O76042 136 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 PDE6HQ13956 83 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 LYPD1Q8N2G4 141 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 ZNF431Q8TF32 576 aaPredicted RBP2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 RAB37Q96AX2 223 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 C14orf144Q96I85 54 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 TIMM21Q9BVV7 248 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 CST9LQ9H4G1 147 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 RTEL1-TNFRSF6BF6WH68 1400 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 ERBINQ96RT1 1412 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 KIF26AQ9ULI4 1882 aaPredicted RBP2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 ZNF407Q9C0G0 2248 aa2.3□□□□□ -2.04
AC055878.1-201ENST00000531858 ANKRD31Q8N7Z5 1873 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 SYNJ1O43426 1573 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 MBD5Q9P267 1494 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 VPS8Q8N3P4 1428 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 TRAV12-2A0A075B6T6 113 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 TCRBV4S1A1TA0A5B7 111 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 C20orf202A1L168 122 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 B4DSR2 109 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 CD14P08571 375 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 AKAIN1P0CW23 69 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 HIST1H1DP16402 221 aaKnown RBP2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 GNG4P50150 75 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 CLLU1Q5K131 121 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
AC055878.1-201ENST00000531858 ATP11AUNQ6ZP68 121 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms