RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 GFI1BQ5VTD9 330 aa12.66□□□□□ -0.38
PSMC3-208ENST00000530887 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
PSMC3-208ENST00000530887 L7N2F9 121 aa12.65□□□□□ -0.38
PSMC3-208ENST00000530887 VAMP2P63027 116 aa12.65□□□□□ -0.38
PSMC3-208ENST00000530887 ZBTB8BQ8NAP8 495 aaPredicted RBP12.65□□□□□ -0.38
PSMC3-208ENST00000530887 DNAJC4Q9NNZ3 241 aa12.65□□□□□ -0.38
PSMC3-208ENST00000530887 PTTG2Q9NZH5 202 aa12.65□□□□□ -0.38
PSMC3-208ENST00000530887 CCDC160A6NGH7 325 aa12.64□□□□□ -0.39
PSMC3-208ENST00000530887 SLC25A5P05141 298 aaKnown RBP12.64□□□□□ -0.39
PSMC3-208ENST00000530887 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
PSMC3-208ENST00000530887 ZNF846Q147U1 533 aa12.64□□□□□ -0.39
PSMC3-208ENST00000530887 MITD1Q8WV92 249 aa12.64□□□□□ -0.39
PSMC3-208ENST00000530887 SRRQ9GZT4 340 aa12.64□□□□□ -0.39
PSMC3-208ENST00000530887 PRELID1Q9Y255 219 aa12.64□□□□□ -0.39
PSMC3-208ENST00000530887 GAGE12BA1L429 117 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 NPIPB6E9PJ23 425 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 EREGO14944 169 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 GAGE7O76087 117 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 GAGE12FP0CL80 117 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 GAGE12GP0CL81 117 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 GAGE12IP0CL82 117 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 CAMLGP49069 296 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 SAT2Q96F10 170 aaPredicted RBP12.63□□□□□ -0.39
PSMC3-208ENST00000530887 LINC00467Q9BRT7 94 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 KRTAP4-5Q9BYR2 181 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 GSKIPQ9P0R6 139 aa12.63□□□□□ -0.39
PSMC3-208ENST00000530887 CCNKO75909 580 aa12.62□□□□□ -0.39
PSMC3-208ENST00000530887 PVALBP20472 110 aaPredicted RBP12.62□□□□□ -0.39
PSMC3-208ENST00000530887 SLAQ13239 276 aa12.62□□□□□ -0.39
PSMC3-208ENST00000530887 PDE6HQ13956 83 aa12.62□□□□□ -0.39
PSMC3-208ENST00000530887 OPCMLQ14982 345 aa12.62□□□□□ -0.39
PSMC3-208ENST00000530887 TMEM37Q8WXS4 190 aa12.62□□□□□ -0.39
PSMC3-208ENST00000530887 C20orf85Q9H1P6 137 aa12.62□□□□□ -0.39
PSMC3-208ENST00000530887 RCL1Q9Y2P8 373 aaKnown RBP12.62□□□□□ -0.39
PSMC3-208ENST00000530887 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
PSMC3-208ENST00000530887 A0A0J9YY99 117 aa12.61□□□□□ -0.39
PSMC3-208ENST00000530887 C7orf66A4D0T2 115 aa12.61□□□□□ -0.39
PSMC3-208ENST00000530887 ESRGQ1W209 222 aa12.61□□□□□ -0.39
PSMC3-208ENST00000530887 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
PSMC3-208ENST00000530887 LINC00477Q96M19 166 aa12.61□□□□□ -0.39
PSMC3-208ENST00000530887 MGST2Q99735 147 aa12.61□□□□□ -0.39
PSMC3-208ENST00000530887 NMBP08949 121 aa12.6□□□□□ -0.39
PSMC3-208ENST00000530887 ZNF431Q8TF32 576 aaPredicted RBP12.6□□□□□ -0.39
PSMC3-208ENST00000530887 SCRT2Q9NQ03 307 aa12.6□□□□□ -0.39
PSMC3-208ENST00000530887 UQCC1Q9NVA1 299 aa12.6□□□□□ -0.39
PSMC3-208ENST00000530887 PGPEP1Q9NXJ5 209 aa12.6□□□□□ -0.39
PSMC3-208ENST00000530887 DNAH5Q8TE73 4624 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 C7orf71A4D174 169 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 K7EP13 123 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 SLC17A3O00476 420 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 MBPP02686 304 aaPredicted RBP12.59□□□□□ -0.39
PSMC3-208ENST00000530887 CT45A10P0DMU9 189 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 HOXA5P20719 270 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 RPL29P47914 159 aaKnown RBP12.59□□□□□ -0.39
PSMC3-208ENST00000530887 BCAP31P51572 246 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 HBG1P69891 147 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 HBG2P69892 147 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 CDPF1Q6NVV7 123 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 NRARPQ7Z6K4 114 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 NFE4Q86UQ8 179 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 EIF4E3Q8N5X7 224 aaKnown RBP12.59□□□□□ -0.39
PSMC3-208ENST00000530887 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 TMEM14CQ9P0S9 112 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 FLVCR2Q9UPI3 526 aa12.59□□□□□ -0.39
PSMC3-208ENST00000530887 PRAC2D3DTV9 90 aa12.58□□□□□ -0.4
PSMC3-208ENST00000530887 S100A11P31949 105 aa12.58□□□□□ -0.4
PSMC3-208ENST00000530887 CAV2P51636 162 aa12.58□□□□□ -0.4
PSMC3-208ENST00000530887 IBA57Q5T440 356 aaKnown RBP12.58□□□□□ -0.4
PSMC3-208ENST00000530887 TMPRSS5Q9H3S3 457 aa12.58□□□□□ -0.4
PSMC3-208ENST00000530887 AAMDCQ9H7C9 122 aa12.58□□□□□ -0.4
PSMC3-208ENST00000530887 WDR83OSQ9Y284 106 aa12.58□□□□□ -0.4
PSMC3-208ENST00000530887 H3BQ15 152 aa12.57□□□□□ -0.4
PSMC3-208ENST00000530887 SIVA1O15304 175 aa12.57□□□□□ -0.4
PSMC3-208ENST00000530887 MPDU1O75352 247 aa12.57□□□□□ -0.4
PSMC3-208ENST00000530887 HIST1H1EP10412 219 aaKnown RBP12.57□□□□□ -0.4
PSMC3-208ENST00000530887 ARL16Q0P5N6 197 aa12.57□□□□□ -0.4
PSMC3-208ENST00000530887 KIR3DS1Q14943 382 aa12.57□□□□□ -0.4
PSMC3-208ENST00000530887 BAK1Q16611 211 aa12.57□□□□□ -0.4
PSMC3-208ENST00000530887 STX12Q86Y82 276 aa12.57□□□□□ -0.4
PSMC3-208ENST00000530887 ZNF586Q9NXT0 402 aa12.57□□□□□ -0.4
PSMC3-208ENST00000530887 ICOSQ9Y6W8 199 aa12.57□□□□□ -0.4
PSMC3-208ENST00000530887 TRBV19A0A075B6N1 114 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 A0A096LPF7 62 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 KLLNB2CW77 178 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 ATP6V1FQ16864 119 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 VWC2Q2TAL6 325 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 Q6ZTI0 123 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 PARD6GQ9BYG4 376 aaPredicted RBP12.56□□□□□ -0.4
PSMC3-208ENST00000530887 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 SLC39A9Q9NUM3 307 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 FUT9Q9Y231 359 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 TIMM9Q9Y5J7 89 aa12.56□□□□□ -0.4
PSMC3-208ENST00000530887 TRGV1A0A0A0MS02 117 aa12.55□□□□□ -0.4
PSMC3-208ENST00000530887 TRBV7-9A0A0J9YWB2 115 aa12.55□□□□□ -0.4
PSMC3-208ENST00000530887 J3KRW8 73 aa12.55□□□□□ -0.4
PSMC3-208ENST00000530887 CRISP2P16562 243 aa12.55□□□□□ -0.4
PSMC3-208ENST00000530887 SULT1A1P50225 295 aa12.55□□□□□ -0.4
PSMC3-208ENST00000530887 TCL1AP56279 114 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms