RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 M0R2P5 195 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 DUX1O43812 170 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 CFIP05156 583 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 PRSS1P07477 247 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 SUB1P53999 127 aaKnown RBP eCLIP6.4□□□□□ -1.391e-8■■□□□ 13.6
CSDE1-214ENST00000530886 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.39
CSDE1-214ENST00000530886 GNG12Q9UBI6 72 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 RAI1Q7Z5J4 1906 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-214ENST00000530886 A0A096LPE4 126 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 TRBV7-7A0A0K0K1E9 115 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 A0A1W2PPZ6 126 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 LINC01565O15544 149 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 RFPL3SP0C7P2 107 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 CKS2P33552 79 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 CRIP1P50238 77 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 FXYD7P58549 80 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 BAALCQ8WXS3 180 aa6.4□□□□□ -1.39
CSDE1-214ENST00000530886 DOCK10Q96BY6 2186 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 PRR14LQ5THK1 2151 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 TNRC18O15417 2968 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-214ENST00000530886 TRAV40A0A0B4J280 105 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 DUSP14O95147 198 aaKnown RBP6.39□□□□□ -1.39
CSDE1-214ENST00000530886 LGALS1P09382 135 aaKnown RBP6.39□□□□□ -1.39
CSDE1-214ENST00000530886 COX6A1P12074 109 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 SRSF2Q01130 221 aaKnown RBP6.39□□□□□ -1.39
CSDE1-214ENST00000530886 SDK2Q58EX2 2172 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 IGLV2-18A0A075B6J9 118 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 CGB3P0DN86 165 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 CGB7P0DN87 165 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 SSR4P51571 173 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 ERHP84090 104 aaKnown RBP6.39□□□□□ -1.39
CSDE1-214ENST00000530886 LYZL1Q6UWQ5 148 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 Q71RC1 249 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-214ENST00000530886 PRNTQ86SH4 94 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 NDUFA11Q86Y39 141 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 ZNF296Q8WUU4 475 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-214ENST00000530886 NPIPB3Q92617 1050 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 CNFNQ9BYD5 112 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 MRPL35Q9NZE8 188 aaKnown RBP6.39□□□□□ -1.39
CSDE1-214ENST00000530886 DMXL2Q8TDJ6 3036 aa6.39□□□□□ -1.39
CSDE1-214ENST00000530886 SAA2P0DJI9 122 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-214ENST00000530886 LYPD1Q8N2G4 141 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 Q8N8P6 123 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 RNF185Q96GF1 192 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 PCNX2A6NKB5 2137 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 LOC400499M0QZD8 3231 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 LY6G6EA0A0G2JKS1 128 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 FAM240AA0A1B0GVK7 77 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 SLC25A45Q8N413 288 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 U3KQA8 63 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 TRAV8-2A0A0B4J237 113 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 IGHV1OR15-9A0A0B4J2B8 117 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 LOC107984156A0A0G2JMH3 177 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 WNT9BO14905 357 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 SLC25A20O43772 301 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 ARL17AQ8IVW1 177 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 C12orf49Q9H741 205 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 TMEM160Q9NX00 188 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 CALYQ9NYX4 217 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 METRNQ9UJH8 293 aa6.38□□□□□ -1.39
CSDE1-214ENST00000530886 TRAV8-1A0A0A6YYK1 113 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 TUSC5Q8IXB3 177 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 MRPL20Q9BYC9 149 aaKnown RBP6.37□□□□□ -1.39
CSDE1-214ENST00000530886 BSNQ9UPA5 3926 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 ZFHX3Q15911 3703 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 J3KT08 172 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 NXPH1P58417 271 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 HES1Q14469 280 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 Q6ZQT7 251 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 GOLT1AQ6ZVE7 132 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 ZNF575Q86XF7 245 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 IMUPQ9GZP8 106 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 PROCRQ9UNN8 238 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 DSCAMO60469 2012 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 MUC3AQ02505 3323 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 IGHV3OR15-7A0A075B7D8 119 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 F8VRH5 84 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 IGHV3-9P01782 118 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 TFF1P04155 84 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 IGLC6P0CF74 106 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 P0DMU3 169 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 FAM231AP0DMU4 169 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 FAM231CP0DMU5 169 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 TMEM30BQ3MIR4 351 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 MBNL2Q5VZF2 373 aaKnown RBP6.37□□□□□ -1.39
CSDE1-214ENST00000530886 CD177Q8N6Q3 437 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 C15orf53Q8NAA6 179 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 DCTN5Q9BTE1 182 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 CXXC4Q9H2H0 198 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 C21orf62Q9NYP8 219 aa6.37□□□□□ -1.39
CSDE1-214ENST00000530886 AGRNO00468 2067 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 TNCP24821 2201 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 PINLYPA6NC86 204 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 H7C1H1 209 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 SCGB2A1O75556 95 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 GRPP07492 148 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 COX6B1P14854 86 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 FLYWCH2Q96CP2 140 aaKnown RBP6.36□□□□□ -1.39
CSDE1-214ENST00000530886 EPOPA6NHQ4 379 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms