RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ASPHD1Q5U4P2 390 aa9.13□□□□□ -0.95
USP35-207ENST00000530546 FA2HQ7L5A8 372 aa9.13□□□□□ -0.95
USP35-207ENST00000530546 M0R1W7 72 aa9.13□□□□□ -0.95
USP35-207ENST00000530546 SIVA1O15304 175 aa9.13□□□□□ -0.95
USP35-207ENST00000530546 NBR2O15453 112 aa9.13□□□□□ -0.95
USP35-207ENST00000530546 DYNAPQ8N1N2 210 aa9.13□□□□□ -0.95
USP35-207ENST00000530546 OR9G4Q8NGQ1 327 aa9.13□□□□□ -0.95
USP35-207ENST00000530546 NDFIP1Q9BT67 221 aa9.13□□□□□ -0.95
USP35-207ENST00000530546 NCBP2LA6PVI3 153 aaKnown RBP9.12□□□□□ -0.95
USP35-207ENST00000530546 CRYGCP07315 174 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 FGF6P10767 208 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 CD300EQ496F6 205 aaPredicted RBP9.12□□□□□ -0.95
USP35-207ENST00000530546 CFHR4Q92496 578 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 FABP2P12104 132 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 ZNF48Q96MX3 618 aaPredicted RBP9.12□□□□□ -0.95
USP35-207ENST00000530546 GTSF1LQ9H1H1 148 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 CSMD1Q96PZ7 3565 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 J3QR89 54 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 LYZP61626 148 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 OR4X2Q8NGF9 303 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 SGK494Q96LW2 274 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 RABAC1Q9UI14 185 aa9.12□□□□□ -0.95
USP35-207ENST00000530546 SVEP1Q4LDE5 3571 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 GNG5P63218 68 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 CT83Q5H943 113 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 TCTEX1D4Q5JR98 221 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 TMEM116Q8NCL8 245 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 PERPQ96FX8 193 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 TRGV9Q99603 122 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 ODF3BA8MYP8 253 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 FOXA3P55318 350 aaPredicted RBP9.11□□□□□ -0.95
USP35-207ENST00000530546 FXYD5Q96DB9 178 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 BPESC1Q9GZL8 116 aa9.11□□□□□ -0.95
USP35-207ENST00000530546 TEX48A0A1B0GUV7 120 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 GAGE12HA6NDE8 117 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 VWC2LB2RUY7 222 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 EFNA4P52798 201 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 RPL24P83731 157 aaKnown RBP9.1□□□□□ -0.95
USP35-207ENST00000530546 BOD1L2Q8IYS8 172 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 RNF5Q99942 180 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 C7orf69Q9H7B7 122 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
USP35-207ENST00000530546 RAB9AP51151 201 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 PVRIGQ6DKI7 326 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 FOXI2Q6ZQN5 318 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 SPATA25Q9BR10 227 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 COL12A1Q99715 3063 aa9.1□□□□□ -0.95
USP35-207ENST00000530546 A1L4Q6 167 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 I3L2K1 104 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 PEX7O00628 323 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 RASL11BQ9BPW5 248 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 A8MWL6 223 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 PRB4P10163 310 aaPredicted RBP9.09□□□□□ -0.95
USP35-207ENST00000530546 CKS1BP61024 79 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 C5orf64Q2M2E5 130 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 ZNF329Q86UD4 541 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 GFRA4Q9GZZ7 299 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 THYN1Q9P016 225 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.09□□□□□ -0.95
USP35-207ENST00000530546 PGPA6NDG6 321 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 H0Y8G0 127 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 ZNF207O43670 478 aaKnown RBP9.09□□□□□ -0.95
USP35-207ENST00000530546 SLC25A5P05141 298 aaKnown RBP9.09□□□□□ -0.95
USP35-207ENST00000530546 FOXE3Q13461 319 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 MTURNQ8N3F0 131 aa9.09□□□□□ -0.95
USP35-207ENST00000530546 RPP21Q9H633 154 aaKnown RBP9.09□□□□□ -0.95
USP35-207ENST00000530546 CACNA1AO00555 2505 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 SMAD7O15105 426 aaKnown RBP9.08□□□□□ -0.96
USP35-207ENST00000530546 SNAI2O43623 268 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 ADAMTSL5Q6ZMM2 481 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 ZNF747Q9BV97 191 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 ACACBO00763 2458 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 K7EIM0 57 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 CSN1S1P47710 185 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 NDPQ00604 133 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 NPBQ8NG41 125 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 HIGD1AQ9Y241 93 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 CFAP46Q8IYW2 2715 aa9.08□□□□□ -0.96
USP35-207ENST00000530546 CACNA1BQ00975 2339 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 NDUFA3O95167 84 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 IGHV3-23P01764 117 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 CCDC144NLQ6NUI1 221 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 MCRIP2Q9BUT9 160 aaKnown RBP9.07□□□□□ -0.96
USP35-207ENST00000530546 SIRPDQ9H106 197 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 TSSC4Q9Y5U2 329 aaPredicted RBP9.07□□□□□ -0.96
USP35-207ENST00000530546 CHEK1O14757 476 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 IGKV1-17P01599 117 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 RBPMS2Q6ZRY4 209 aaKnown RBP9.07□□□□□ -0.96
USP35-207ENST00000530546 ARPC1AQ92747 370 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 NAA38Q9BRA0 125 aaKnown RBP9.07□□□□□ -0.96
USP35-207ENST00000530546 PRSS22Q9GZN4 317 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 SPG11Q96JI7 2443 aa9.07□□□□□ -0.96
USP35-207ENST00000530546 IGHV3OR16-10A0A075B7F0 116 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 RAB37Q96AX2 223 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 TMUB1Q9BVT8 246 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 AP5S1Q9NUS5 200 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 SIGLEC8Q9NYZ4 499 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 SELENOKQ9Y6D0 94 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms