RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 PRELID1Q9Y255 219 aa8.49□□□□□ -1.05
CAPN1-217ENST00000529133 YTHDF2Q9Y5A9 579 aaKnown RBP8.49□□□□□ -1.05
CAPN1-217ENST00000529133 A0A1W2PRE2 83 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 FAM74A7A6NL05 159 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 ZNF705FA8MVS1 300 aaPredicted RBP8.48□□□□□ -1.05
CAPN1-217ENST00000529133 GGTLC3B5MD39 225 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 KRBOX1C9JBD0 128 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 PRAC2D3DTV9 90 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 F6UB75 175 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 FOXI2Q6ZQN5 318 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 COMMD7Q86VX2 200 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 CCDC28AQ8IWP9 274 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 LYPD6BQ8NI32 183 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 PCNPQ8WW12 178 aaKnown RBP8.48□□□□□ -1.05
CAPN1-217ENST00000529133 RPUSD4Q96CM3 377 aaKnown RBP8.48□□□□□ -1.05
CAPN1-217ENST00000529133 CMYA5Q8N3K9 4069 aa8.48□□□□□ -1.05
CAPN1-217ENST00000529133 PGPA6NDG6 321 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 K7EIL1 84 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 PAGE4O60829 102 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 PPT1P50897 306 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 ACTL10Q5JWF8 245 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 GDF5OSQ5U4N7 250 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 UQCC3Q6UW78 93 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 SAV1Q9H4B6 383 aaPredicted RBP8.47□□□□□ -1.05
CAPN1-217ENST00000529133 SRD5A3Q9H8P0 318 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 GNG13Q9P2W3 67 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 ARL2-SNX15V9GYD0 113 aa8.47□□□□□ -1.05
CAPN1-217ENST00000529133 NOTCH3Q9UM47 2321 aa8.46□□□□□ -1.05
CAPN1-217ENST00000529133 A0A0J9YX75 114 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 SLC25A5P05141 298 aaKnown RBP8.46□□□□□ -1.06
CAPN1-217ENST00000529133 IGHV4-30-4P0DP06 118 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 HLA-DRB4P13762 266 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 CSN1S1P47710 185 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 ATP5G3P48201 142 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 SUMO1P63165 101 aaKnown RBP8.46□□□□□ -1.06
CAPN1-217ENST00000529133 GNG5P63218 68 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 TOR2AQ5JU69 321 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 EBLN2Q6P2I7 272 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 C5orf17Q8NAS9 161 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 OR8A1Q8NGG7 326 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 MANBALQ9NQG1 85 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 HLA-DRB4X5D2U9 266 aa8.46□□□□□ -1.06
CAPN1-217ENST00000529133 IGKV2-40A0A087WW87 121 aaPredicted RBP8.45□□□□□ -1.06
CAPN1-217ENST00000529133 RAB19A4D1S5 217 aa8.45□□□□□ -1.06
CAPN1-217ENST00000529133 H3BMM0 161 aa8.45□□□□□ -1.06
CAPN1-217ENST00000529133 IFNA1P01562 189 aa8.45□□□□□ -1.06
CAPN1-217ENST00000529133 IGKV2D-40P01614 121 aaPredicted RBP8.45□□□□□ -1.06
CAPN1-217ENST00000529133 ZNF705DP0CH99 300 aaPredicted RBP8.45□□□□□ -1.06
CAPN1-217ENST00000529133 ZNF705BP0CI00 300 aaPredicted RBP8.45□□□□□ -1.06
CAPN1-217ENST00000529133 HIST1H1AQ02539 215 aaPredicted RBP8.45□□□□□ -1.06
CAPN1-217ENST00000529133 PMS2P11Q13670 270 aa8.45□□□□□ -1.06
CAPN1-217ENST00000529133 CST9LP1Q5W188 147 aa8.45□□□□□ -1.06
CAPN1-217ENST00000529133 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
CAPN1-217ENST00000529133 CMTM2Q8TAZ6 248 aa8.45□□□□□ -1.06
CAPN1-217ENST00000529133 RXFP4Q8TDU9 374 aa8.45□□□□□ -1.06
CAPN1-217ENST00000529133 RPH3ALQ9UNE2 315 aa8.45□□□□□ -1.06
CAPN1-217ENST00000529133 MGAM2Q2M2H8 2515 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 LOC102723971A0A1B0GUV8 181 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
CAPN1-217ENST00000529133 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
CAPN1-217ENST00000529133 A8MZ25 164 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 DIRC3C9JPN6 131 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 NPIPB6E9PJ23 425 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 DUSP14O95147 198 aaKnown RBP8.44□□□□□ -1.06
CAPN1-217ENST00000529133 TCRAP04437 139 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
CAPN1-217ENST00000529133 BCL2P10415 239 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 RPL35AP18077 110 aaKnown RBP8.44□□□□□ -1.06
CAPN1-217ENST00000529133 CNN1P51911 297 aaKnown RBP8.44□□□□□ -1.06
CAPN1-217ENST00000529133 HAGHQ16775 308 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 STHQ8IWL8 128 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 OR10J6PQ8NGY7 276 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 NKX6-2Q9C056 277 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-217ENST00000529133 TUBA4BQ9H853 241 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 EPDR1Q9UM22 224 aa8.44□□□□□ -1.06
CAPN1-217ENST00000529133 PKD1L1Q8TDX9 2849 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 A8MTW9 85 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 C11orf94C9JXX5 98 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 IGKV3-20P01619 116 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 DEFA6Q01524 100 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 LINC00322Q6ZN03 302 aaPredicted RBP8.43□□□□□ -1.06
CAPN1-217ENST00000529133 GOLT1AQ6ZVE7 132 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 OR4B1Q8NGF8 309 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 CLUHP3Q96NS8 147 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 VGLL1Q99990 258 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 TCEAL7Q9BRU2 100 aa8.43□□□□□ -1.06
CAPN1-217ENST00000529133 LOC102724200A0A096LPH7 203 aaPredicted RBP8.42□□□□□ -1.06
CAPN1-217ENST00000529133 RBAKDNA6NC62 111 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 PEX7O00628 323 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 FRMD6-AS1P0C7T7 363 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 TAGLN2P37802 199 aaKnown RBP8.42□□□□□ -1.06
CAPN1-217ENST00000529133 ERCC8Q13216 396 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 AMTNQ6UX39 209 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 C9orf47Q6ZRZ4 202 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 CYB561D1Q8N8Q1 229 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 MRAPQ8TCY5 172 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 ATG101Q9BSB4 218 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
CAPN1-217ENST00000529133 VAX2Q9UIW0 290 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms