RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 A0A1B0GW54 56 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 DHRS12A0PJE2 317 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 LINC00862A6NCI5 91 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 A8MWL6 223 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 LY6LH3BQJ8 138 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 J3QQQ9 107 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 M0R2Z0 102 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 PLA2G10O15496 165 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 IFI6P09912 130 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 UCHL1P09936 223 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 MRPS10P82664 201 aaKnown RBP3.62□□□□□ -1.83
PCF11-202ENST00000528336 NEDD8Q15843 81 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 TMEM69Q5SWH9 247 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 SLC25A34Q6PIV7 304 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 LCA10Q71F78 164 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 SCXQ7RTU7 201 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 H1FOOQ8IZA3 346 aaPredicted RBP3.62□□□□□ -1.83
PCF11-202ENST00000528336 APCDD1LQ8NCL9 501 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 CMBLQ96DG6 245 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 CHCHD7Q9BUK0 85 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 NKX6-2Q9C056 277 aaPredicted RBP3.62□□□□□ -1.83
PCF11-202ENST00000528336 MRPL16Q9NX20 251 aaKnown RBP3.62□□□□□ -1.83
PCF11-202ENST00000528336 OR5AC2Q9NZP5 309 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 MCTS1Q9ULC4 181 aaKnown RBP3.62□□□□□ -1.83
PCF11-202ENST00000528336 CACNA1BQ00975 2339 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 CHD6Q8TD26 2715 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 PIEZO2Q9H5I5 2752 aa3.62□□□□□ -1.83
PCF11-202ENST00000528336 SCN3AQ9NY46 2000 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 IGSF10Q6WRI0 2623 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 ATMQ13315 3056 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 NUP210LQ5VU65 1888 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 SVILO95425 2214 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 IGLV11-55A0A075B6I3 123 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 IGKV1D-43A0A0B4J1Z2 117 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 A0A0G2JND7 137 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 F6UZH7 168 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 GGCTO75223 188 aaKnown RBP3.61□□□□□ -1.83
PCF11-202ENST00000528336 ZNF688P0C7X2 276 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 ZNF705DP0CH99 300 aaPredicted RBP3.61□□□□□ -1.83
PCF11-202ENST00000528336 MUC1P15941 1255 aaPredicted RBP3.61□□□□□ -1.83
PCF11-202ENST00000528336 UBE2AP49459 152 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 ZNF80P51504 273 aaPredicted RBP3.61□□□□□ -1.83
PCF11-202ENST00000528336 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 GNGT1P63211 74 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 CCL20P78556 96 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 RTL8BQ17RB0 113 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 RRN3P1Q2M238 152 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 LYRM7Q5U5X0 104 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 IGFL3Q6UXB1 125 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 FDCSPQ8NFU4 85 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 OR4A5Q8NH83 315 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 RPS4Y2Q8TD47 263 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 H1FXQ92522 213 aaKnown RBP3.61□□□□□ -1.83
PCF11-202ENST00000528336 PSMF1Q92530 271 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 SLAMF6Q96DU3 332 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 RMI2Q96E14 147 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 PDCD10Q9BUL8 212 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 ZNF471Q9BX82 626 aaPredicted RBP3.61□□□□□ -1.83
PCF11-202ENST00000528336 DPY30Q9C005 99 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 TUBA4BQ9H853 241 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 TP73-AS1Q9UF72 201 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 FAM208BQ5VWN6 2430 aa3.61□□□□□ -1.83
PCF11-202ENST00000528336 NBEAQ8NFP9 2946 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 ZNF73O43830 326 aaPredicted RBP3.6□□□□□ -1.83
PCF11-202ENST00000528336 DPM2O94777 84 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 IGKV1-5P01602 117 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 TRGC2P03986 189 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 CLPSP04118 112 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 INAFM2P0DMQ5 153 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 S100A3P33764 101 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 POLR2JP52435 117 aaKnown RBP3.6□□□□□ -1.83
PCF11-202ENST00000528336 CMC4P56277 68 aaPredicted RBP3.6□□□□□ -1.83
PCF11-202ENST00000528336 C1orf140Q5VVS0 124 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 AMMECR1LQ6DCA0 310 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 RPS19BP1Q86WX3 136 aaKnown RBP3.6□□□□□ -1.83
PCF11-202ENST00000528336 FER1L6-AS1Q8NA97 138 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 FNDC9Q8TBE3 224 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 C10orf82Q8WW14 230 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 RNASE6Q93091 150 aaKnown RBP3.6□□□□□ -1.83
PCF11-202ENST00000528336 BORCS8Q96FH0 119 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 YIPF3Q9GZM5 350 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 EFCAB1Q9HAE3 211 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 OTORQ9NRC9 128 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 BOD1L1Q8NFC6 3051 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 KALRNO60229 2985 aa3.6□□□□□ -1.83
PCF11-202ENST00000528336 CFAP46Q8IYW2 2715 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 CORTO00230 105 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 LINC00869P0C866 280 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 NUDT2P50583 147 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 INSL3P51460 131 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 BSPH1Q075Z2 132 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 OR8G1Q15617 311 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 ZNF181Q2M3W8 571 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 FAM104BQ5XKR9 115 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 TMEM14EPQ6UXP3 125 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 LINC01551Q86U37 167 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 CLECL1Q8IZS7 167 aa3.59□□□□□ -1.83
PCF11-202ENST00000528336 RPP25LQ8N5L8 163 aaKnown RBP3.59□□□□□ -1.83
PCF11-202ENST00000528336 ZNF418Q8TF45 676 aaPredicted RBP3.59□□□□□ -1.83
PCF11-202ENST00000528336 SHANK2-AS3Q9BTD1 123 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms