RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 HERC2O95714 4834 aa7.36□□□□□ -1.23
PRPF40B-204ENST00000527253 LYRM9A8MSI8 78 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 INMT-MINDY4F8WBC2 141 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 M0R2N4 97 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 CT45A10P0DMU9 189 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 DEFB130BP0DP73 79 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 DEFB130AP0DP74 79 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 HTN1P15515 57 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 TAS2R60P59551 318 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 HBG1P69891 147 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 HBG2P69892 147 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 ATP6V1FQ16864 119 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 STX12Q86Y82 276 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 THAP6Q8TBB0 222 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 NPCDR1Q9BY65 106 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 PTTG2Q9NZH5 202 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 DNAH17Q9UFH2 4485 aa7.35□□□□□ -1.23
PRPF40B-204ENST00000527253 NACAE9PAV3 2078 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 KIAA1109Q2LD37 5005 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 TRBV19A0A075B6N1 114 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 NPIPB6E9PJ23 425 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 M0R3E3 92 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 RTL8CO15255 209 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 PYYP10082 97 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 H2BFSP57053 126 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 LRRC37A5PQ49AS3 106 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 GFI1BQ5VTD9 330 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 TMEM256Q8N2U0 113 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 OR5C1Q8NGR4 320 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 OR10J6PQ8NGY7 276 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 RNASE8Q8TDE3 154 aaKnown RBP7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 FAM167A-AS1Q96KT0 104 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 PFDN5Q99471 154 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 SLC25A2Q9BXI2 301 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 NMES1Q9C002 83 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 TMEM14CQ9P0S9 112 aa7.34□□□□□ -1.23
PRPF40B-204ENST00000527253 IGLV2-18A0A075B6J9 118 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 A0A1B0GVY2 172 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 E5RGE8 158 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 J3KRW8 73 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 ZNF253O75346 499 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 HIST1H1EP10412 219 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 ERCC8Q13216 396 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 CLINT1Q14677 625 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 GUK1Q16774 197 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 Q6ZR54 194 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 MIR17HGQ75NE6 70 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 MARVELD1Q9BSK0 173 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 NOP10Q9NPE3 64 aaKnown RBP7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 DNAH2Q9P225 4427 aa7.33□□□□□ -1.24
PRPF40B-204ENST00000527253 HECTD4Q9Y4D8 3996 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 FAT2Q9NYQ8 4349 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 CBY3A6NI87 242 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 H7BYZ3 331 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 PRAF2O60831 178 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 MPDU1O75352 247 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 LGALS9BQ3B8N2 356 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 LCE2DQ5TA82 110 aaPredicted RBP7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 EXOC3-AS1Q8N2X6 119 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 C16orf74Q96GX8 76 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 FAM19A4Q96LR4 140 aa7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 WDR61Q9GZS3 305 aaKnown RBP7.32□□□□□ -1.24
PRPF40B-204ENST00000527253 TRAV12-3A0A0B4J271 114 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 F5H768 121 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 RLN2P04090 185 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 LEPP41159 167 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 RNF212Q495C1 297 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 ZNF493Q6ZR52 646 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 UBE2DNLQ8IWF7 75 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 LINC00612Q8N6U2 182 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 TMEM263Q8WUH6 116 aaKnown RBP7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 BLNKQ8WV28 456 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 PPP1R1CQ8WVI7 109 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 MRPL53Q96EL3 112 aaKnown RBP7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 ODF3Q96PU9 254 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 C20orf144Q9BQM9 153 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 SLC25A31Q9H0C2 315 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 AGPAT4-IT1Q9H0P7 198 aa7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 TIMM8BQ9Y5J9 83 aaPredicted RBP7.31□□□□□ -1.24
PRPF40B-204ENST00000527253 MPC2O95563 127 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 ATP5G1P05496 136 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 ATP5G3P48201 142 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 CYCSP99999 105 aaKnown RBP7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 CD300CQ08708 224 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 Q6ZQT7 251 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 LINC00336Q6ZUF6 198 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 C15orf53Q8NAA6 179 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 FXYD5Q96DB9 178 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 ZNF503Q96F45 646 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 VGLL1Q99990 258 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 TIMM9Q9Y5J7 89 aa7.3□□□□□ -1.24
PRPF40B-204ENST00000527253 IGKV2-40A0A087WW87 121 aaPredicted RBP7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 KLLNB2CW77 178 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 SSNA1O43805 119 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 ZNF324O75467 553 aaPredicted RBP7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 NUDT3O95989 172 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 IGKV2D-40P01614 121 aaPredicted RBP7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 NBEAP1P0C6P0 100 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 HOXA5P20719 270 aa7.29□□□□□ -1.24
PRPF40B-204ENST00000527253 BTN1A1Q13410 526 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms