RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 TAX1BP3O14907 124 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 ORC5O43913 435 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 CST8O60676 142 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 APOC1P02654 83 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 TSPAN19P0C672 248 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 TRAPPC2P0DI81 140 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 TRAPPC2BP0DI82 140 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 P0DMU3 169 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 FAM231AP0DMU4 169 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 FAM231CP0DMU5 169 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 RPL22P35268 128 aaKnown RBP1.98□□□□□ -2.09
CSDE1-211ENST00000525970 SLC38A11Q08AI6 406 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 SCGB2B2Q4G0G5 96 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 BRMS1LQ5PSV4 323 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 ZNF826PQ6ZT77 177 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 C3orf56Q8N813 242 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 NUP35Q8NFH5 326 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 OR9Q1Q8NGQ5 310 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 ZNF431Q8TF32 576 aaPredicted RBP1.98□□□□□ -2.09
CSDE1-211ENST00000525970 CANT1Q8WVQ1 401 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 MALSU1Q96EH3 234 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 MCEEQ96PE7 176 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 HIST1H2BLQ99880 126 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 GINS4Q9BRT9 223 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 CCDC32Q9BV29 185 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 PBDC1Q9BVG4 233 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 TMEM126AQ9H061 195 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 CCDC167Q9P0B6 97 aa1.98□□□□□ -2.09
CSDE1-211ENST00000525970 TJP1Q07157 1748 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 PKD1L3Q7Z443 1732 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 GBF1Q92538 1859 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 C5P01031 1676 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 ZNF142P52746 1687 aaPredicted RBP1.97□□□□□ -2.09
CSDE1-211ENST00000525970 RREB1Q92766 1687 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 DUXBA0A1W2PPF3 345 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 TCRBV3S1A0A5B6 114 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 F8W036 122 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 ZNF737O75373 536 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 OGNP20774 298 aaKnown RBP1.97□□□□□ -2.09
CSDE1-211ENST00000525970 SDC4P31431 198 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 NCS1P62166 190 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 DEFA5Q01523 94 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 SMCO1Q147U7 214 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 TMEM155Q4W5P6 130 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 KHDC3LQ587J8 217 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 HAGHLQ6PII5 290 aaPredicted RBP1.97□□□□□ -2.09
CSDE1-211ENST00000525970 LINC00299Q6ZSB3 139 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 TAC4Q86UU9 113 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 HYLS1Q96M11 299 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 GPER1Q99527 375 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 TMEM70Q9BUB7 260 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 COPZ2Q9P299 210 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 NDUFAF1Q9Y375 327 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 EML6Q6ZMW3 1958 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 TNS3Q68CZ2 1445 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 BCORQ6W2J9 1755 aa1.97□□□□□ -2.09
CSDE1-211ENST00000525970 USP54Q70EL1 1684 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 TOPAZ1Q8N9V7 1692 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 LTN1O94822 1766 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 LAMB2P55268 1798 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 DLEC1Q9Y238 1755 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 LOC100130705A0A1B0GUX0 176 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 RIIAD1A6NNX1 92 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 APOC4-APOC2K7ER74 178 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 M0R233 179 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 DHFRP00374 187 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 IFNA21P01568 189 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 APOC2P02655 101 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 APOC3P02656 99 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 SDC2P34741 201 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 EIF5AP63241 154 aaKnown RBP1.96□□□□□ -2.1
CSDE1-211ENST00000525970 LTC4SQ16873 150 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 TCTE3Q8IZS6 198 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 OR13D1Q8NGV5 346 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 PFDN5Q99471 154 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 TCEAL7Q9BRU2 100 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 TMEM106BQ9NUM4 274 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 MED11Q9P086 117 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 PCTPQ9UKL6 214 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 GINS2Q9Y248 185 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 NUP188Q5SRE5 1749 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.96□□□□□ -2.1
CSDE1-211ENST00000525970 FER1L6Q2WGJ9 1857 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 COL4A5P29400 1685 aa1.96□□□□□ -2.1
CSDE1-211ENST00000525970 FN1P02751 2386 aaKnown RBP1.95□□□□□ -2.1
CSDE1-211ENST00000525970 C1orf167Q5SNV9 1468 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 TOGARAM1Q9Y4F4 1720 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 DIP2BQ9P265 1576 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 IGKV1D-42A0A075B6H8 117 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 GNG14A0A1W2PPG7 69 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 MAP1LC3B2A6NCE7 125 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 PRORSD1PA6NEY8 169 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 PDCD5O14737 125 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 MRPS14O60783 128 aaKnown RBP1.95□□□□□ -2.1
CSDE1-211ENST00000525970 PMP2P02689 132 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 IFNA4P05014 189 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 CRHP06850 196 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 HLA-EP13747 358 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 KDELR1P24390 212 aa1.95□□□□□ -2.1
CSDE1-211ENST00000525970 S100PP25815 95 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms