RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PCP2Q8IVA1 136 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 RNF182Q8N6D2 247 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 C5orf17Q8NAS9 161 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 WFDC11Q8NEX6 87 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 C16orf74Q96GX8 76 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 OPRPNQ99935 248 aaPredicted RBP3.08□□□□□ -1.92
CD44-213ENST00000525209 VGLL1Q99990 258 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 Q9H521 79 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 C11orf1Q9H5F2 150 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 C16orf95Q9H693 158 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 SDF2L1Q9HCN8 221 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 C21orf62Q9NYP8 219 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 LINC00588Q9Y4M8 146 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 HLA-DRB4X5D2U9 266 aa3.08□□□□□ -1.92
CD44-213ENST00000525209 TP53BP1Q12888 1972 aaPredicted RBP3.07□□□□□ -1.92
CD44-213ENST00000525209 EML6Q6ZMW3 1958 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 C5orf42Q9H799 3197 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 CACNA1BQ00975 2339 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 ZFP92A6NM28 416 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 K7ERJ3 54 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 UQCRQO14949 82 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 IGKV1-16P04430 117 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 SLC25A5P05141 298 aaKnown RBP3.07□□□□□ -1.92
CD44-213ENST00000525209 IGHV4-34P06331 123 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 CD14P08571 375 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 GIG44P09565 113 aaPredicted RBP3.07□□□□□ -1.92
CD44-213ENST00000525209 CCL3P10147 92 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 CD28P10747 220 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 NANOS2P60321 138 aaKnown RBP3.07□□□□□ -1.92
CD44-213ENST00000525209 CATR1Q13166 79 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 TMEM155Q4W5P6 130 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 TMEM91Q6ZNR0 172 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 FOXI2Q6ZQN5 318 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 AAED1Q7RTV5 226 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 TEN1Q86WV5 123 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 ZNF101Q8IZC7 436 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 MORN4Q8NDC4 146 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 CIRBP-AS1Q8TBR5 109 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 VOPP1Q96AW1 172 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 ZFHX2Q9C0A1 2572 aaPredicted RBP3.07□□□□□ -1.92
CD44-213ENST00000525209 DSCAMO60469 2012 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 TECTAO75443 2155 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 CACNA1AO00555 2505 aa3.07□□□□□ -1.92
CD44-213ENST00000525209 PNMA8CA0A1B0GUJ8 204 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 H3BQF6 201 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 PHOX2AO14813 284 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 T-ENOLP0DO92 83 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 PYYP10082 97 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 HLA-DMBP28068 263 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 MYH9P35579 1960 aaKnown RBP3.06□□□□□ -1.92
CD44-213ENST00000525209 ADM2Q7Z4H4 148 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 HIST3H2BBQ8N257 126 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 ZFP62Q8NB50 900 aaPredicted RBP3.06□□□□□ -1.92
CD44-213ENST00000525209 OR10P1Q8NGE3 313 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 OR5D16Q8NGK9 328 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 PRELID3AQ96N28 172 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 HIST1H2BLQ99880 126 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 UPK3BQ9BT76 320 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 NPCDR1Q9BY65 106 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 PLXNA4Q9HCM2 1894 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 SPTBN5Q9NRC6 3674 aaKnown RBP3.06□□□□□ -1.92
CD44-213ENST00000525209 OSTCQ9NRP0 149 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 COMMD3Q9UBI1 195 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 HSPE1-MOB4S4R3N1 261 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 SPTBN4Q9H254 2564 aa3.06□□□□□ -1.92
CD44-213ENST00000525209 SVILO95425 2214 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 NOTCH4Q99466 2003 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 PLXNA3P51805 1871 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 TRGV10A0A0A0MS01 117 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 IGHV1-3A0A0C4DH29 117 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 A8MWP4 228 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 IGHV1-46P01743 117 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 MRPS21P82921 87 aaKnown RBP3.05□□□□□ -1.92
CD44-213ENST00000525209 SYCNQ0VAF6 134 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 PYY3Q5JQD4 70 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 C16orf47Q6ZP98 133 aaPredicted RBP3.05□□□□□ -1.92
CD44-213ENST00000525209 C7orf65Q6ZTY9 151 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 MIR17HGQ75NE6 70 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 TTC9CQ8N5M4 171 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 TMEM105Q8N8V8 129 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 TTTY13Q9BZ97 58 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 GABARAPL1Q9H0R8 117 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 TXNL4BQ9NX01 149 aaKnown RBP3.05□□□□□ -1.92
CD44-213ENST00000525209 EPDR1Q9UM22 224 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 Q9Y3F1 56 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 PIEZO1Q92508 2521 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 FAM186AA6NE01 2351 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 ZNF318Q5VUA4 2279 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 XIRP2A4UGR9 3374 aa3.05□□□□□ -1.92
CD44-213ENST00000525209 CITO14578 2027 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 TRAV12-2A0A075B6T6 113 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 IGHV3-64DA0A0J9YX35 117 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 TMEM223A0PJW6 202 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 M0R129 80 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 KLF7O75840 302 aaPredicted RBP3.04□□□□□ -1.92
CD44-213ENST00000525209 IGKV1D-33P01593 117 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 IGKV1-33P01594 117 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 IGHV3-7P01780 117 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 CD2P06729 351 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 SPINK8P0C7L1 97 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms